Gene detail information of Glyur000006s00001663.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49570.1 | 1.00E-114 | Peroxidase superfamily protein |
| NR | XP_007156533.1 | 0 | hypothetical protein PHAVU_003G294000g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FX85|PER10_ARATH | 7.00E-147 | Peroxidase 10 (Precursor) |
| trEMBL | tr|V7CE94|V7CE94_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW28527.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00006 | 374151 | 376635 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00430 | E1.11.1.7 | EC:1.11.1.7 | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000006s00001663.1 | PF00141.18 | peroxidase | 53 | 296 | 2.50E-76 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.375 |
| SRR1783600 | control | 1.312 |
| SRR1783602 | moderate drought stress | 1.633 |
| SRR1811619 | moderate drought stress | 1.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.946 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.947 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.938 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.926 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 64.786 |
| SRR2868004 | Drought Stress (root) | 153.514 |
| SRR2967015 | Control (root) | 150.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.058 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 8.685 |
| SRR9715742 | Root | 6.345 |
| SRR9715743 | Root | 6.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.065 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.675 |
| SRR8400027 | Control - Root | 14.841 |