Gene detail information of Glyur000006s00001662 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G26520.1 | 5.00E-17 | |
| NR | XP_007156534.1 | 2.02E-50 | hypothetical protein PHAVU_003G294100g [Phaseolus vulgaris] |
| trEMBL | tr|V7CGP5|V7CGP5_PHAVU | 8.00E-51 | Uncharacterized protein {ECO:0000313|EMBL:ESW28528.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00006 | 364656 | 365063 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.171 |
| SRR1783600 | control | 7.632 |
| SRR1783602 | moderate drought stress | 3.070 |
| SRR1811619 | moderate drought stress | 2.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.833 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.569 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.179 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.113 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.653 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.567 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.197 |
| SRR2868004 | Drought Stress (root) | 1.208 |
| SRR2967015 | Control (root) | 0.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.327 |
| SRR9715740 | Leaf | 0.027 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 6.704 |
| SRR9715742 | Root | 1.139 |
| SRR9715743 | Root | 2.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.026 |
| SRR8749028 | MeJA induced 9h | 3.146 |
| SRR8749029 | MeJA induced 9h | 1.789 |
| SRR8749030 | Uninduced | 0.117 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 1.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.849 |
| SRR8400027 | Control - Root | 5.402 |