Gene detail information of Glyur000006s00001621 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42900.3 | 9.00E-05 | cold regulated gene 27 |
| NR | XP_004505226.1 | 3.89E-122 | PREDICTED: uncharacterized protein LOC101503228 [Cicer arietinum] |
| trEMBL | tr|G7JL76|G7JL76_MEDTR | 3.00E-109 | Uncharacterized protein {ECO:0000313|EMBL:AES90163.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00006 | 91338 | 95583 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.144 |
| SRR1783600 | control | 1.153 |
| SRR1783602 | moderate drought stress | 2.173 |
| SRR1811619 | moderate drought stress | 2.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.038 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.883 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.492 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.963 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.050 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.987 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.200 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.343 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.717 |
| SRR2868004 | Drought Stress (root) | 3.025 |
| SRR2967015 | Control (root) | 8.685 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.376 |
| SRR9715740 | Leaf | 0.274 |
| SRR9715741 | Leaf | 0.318 |
| SRR9715739 | Root | 0.213 |
| SRR9715742 | Root | 0.555 |
| SRR9715743 | Root | 0.926 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.419 |
| SRR8749028 | MeJA induced 9h | 9.640 |
| SRR8749029 | MeJA induced 9h | 13.121 |
| SRR8749030 | Uninduced | 2.702 |
| SRR8749031 | Uninduced | 6.565 |
| SRR8749032 | Uninduced | 9.931 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.621 |
| SRR8400027 | Control - Root | 4.549 |