Gene detail information of Glyur000006s00001617 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G06610.1 | 2.00E-118 | Protein of unknown function (DUF620) |
| NR | KHN43571.1 | 0 | hypothetical protein glysoja_002154 [Glycine soja] |
| trEMBL | tr|I1NAZ2|I1NAZ2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G39190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00006 | 68777 | 71399 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000006s00001617.1 | PF04788.7 | DUF620 | 109 | 345 | 8.30E-99 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.978 |
| SRR1783600 | control | 6.320 |
| SRR1783602 | moderate drought stress | 6.005 |
| SRR1811619 | moderate drought stress | 6.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.909 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.119 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.091 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.810 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.348 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.784 |
| SRR2868004 | Drought Stress (root) | 5.185 |
| SRR2967015 | Control (root) | 4.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.862 |
| SRR9715740 | Leaf | 0.175 |
| SRR9715741 | Leaf | 1.076 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 3.902 |
| SRR9715743 | Root | 2.758 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.698 |
| SRR8749028 | MeJA induced 9h | 1.807 |
| SRR8749029 | MeJA induced 9h | 2.144 |
| SRR8749030 | Uninduced | 0.673 |
| SRR8749031 | Uninduced | 0.149 |
| SRR8749032 | Uninduced | 0.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.414 |
| SRR8400027 | Control - Root | 6.285 |