Gene detail information of Glyur000005s00001106 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G04900.1 | 0 | Protein of unknown function (DUF185) |
| NR | XP_004486490.1 | 0 | PREDICTED: uncharacterized protein LOC101507742 [Cicer arietinum] |
| trEMBL | tr|K7MB59|K7MB59_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G14130.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00005 | 610020 | 618280 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000005s00001106.1 | PF02636.12 | Methyltransf_28 | 103 | 372 | 3.40E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.626 |
| SRR1783600 | control | 2.668 |
| SRR1783602 | moderate drought stress | 2.001 |
| SRR1811619 | moderate drought stress | 2.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.003 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.152 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.919 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.216 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.352 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.425 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.410 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.411 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.442 |
| SRR2868004 | Drought Stress (root) | 2.464 |
| SRR2967015 | Control (root) | 2.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.701 |
| SRR9715740 | Leaf | 3.007 |
| SRR9715741 | Leaf | 1.646 |
| SRR9715739 | Root | 0.353 |
| SRR9715742 | Root | 0.992 |
| SRR9715743 | Root | 0.908 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.392 |
| SRR8749028 | MeJA induced 9h | 6.430 |
| SRR8749029 | MeJA induced 9h | 7.362 |
| SRR8749030 | Uninduced | 1.623 |
| SRR8749031 | Uninduced | 1.113 |
| SRR8749032 | Uninduced | 1.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.642 |
| SRR8400027 | Control - Root | 2.987 |