Gene detail information of Glyur000005s00001100 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G19980.1 | 3.00E-49 | cytomatrix protein-related |
| NR | XP_004486498.1 | 0 | PREDICTED: early endosome antigen 1-like isoform X3 [Cicer arietinum] |
| trEMBL | tr|I1MG83|I1MG83_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G14260.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00005 | 571442 | 574371 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.563 |
| SRR1783600 | control | 3.537 |
| SRR1783602 | moderate drought stress | 5.557 |
| SRR1811619 | moderate drought stress | 5.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.775 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.803 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.132 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.162 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.792 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.920 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.935 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.707 |
| SRR2868004 | Drought Stress (root) | 6.555 |
| SRR2967015 | Control (root) | 6.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.487 |
| SRR9715740 | Leaf | 1.558 |
| SRR9715741 | Leaf | 3.212 |
| SRR9715739 | Root | 0.245 |
| SRR9715742 | Root | 1.284 |
| SRR9715743 | Root | 1.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.794 |
| SRR8749028 | MeJA induced 9h | 7.204 |
| SRR8749029 | MeJA induced 9h | 4.040 |
| SRR8749030 | Uninduced | 1.360 |
| SRR8749031 | Uninduced | 0.259 |
| SRR8749032 | Uninduced | 0.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.840 |
| SRR8400027 | Control - Root | 10.262 |