Gene detail

Gene detail information of Glyur000005s00001092

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G64890.1	6.00E-120	Major facilitator superfamily protein
NR	AFK43247.1	0	unknown [Lotus japonicus]
COG	YP_007125347.1	7.00E-36	folate/biopterin transporter [Microcoleus sp. PCC 7113]
Swissprot	tr\|Q9XIQ7\|FBT7_ARATH	2.00E-176	Probable folate-biopterin transporter 7
trEMBL	tr\|I3SSK5\|I3SSK5_LOTJA	0	Uncharacterized protein {ECO:0000313\|EMBL:AFK43247.1}

Sequence

Transcript Sequence

>Glyur000005s00001092.1
ATGGTGTCTTCGGAGGGTGGTGATAGTAGCAGTAACGGTGGTGGCGAATTGATGAGGAGGAAGGTGCTGGGTTTGGGGTATTGGGTGCAAGGATTCAGGTGCTTCCCATGGTTGGCAGTGAGTTTCTTCCTCAAGGATGGCCTCNATGTGGACCCTTCCACTCTCCAACTTCTTCAGAATTCAGCCAACCTTCCCATGGTTGGGAAGCCCCTCTATGGCCTCGTTTCTGACTCCATCTACATCTCTGGCCAGCATCCTTTCTTGCAGGCACTGTCATGGCTAGCAATAGCAATCTCTCCATCGAGCATATCTATTTTCATTATCTCGATATACCTCCTCCTTAGTAATCTAGGCGCTTCAATAGCTGAGGTAGCAAATGATGCCATTGTTGCGGAGATGGGTAAACAGCCTCCTCCTTCAACCAAGCACTCTCAACCATCTTCCTCAGGCAGCCTCCAATCATTTGTTTGGATAGCTTCCTCTGTTGGAGGAGTCCTTGGAAACCTTCTCGGTGGCATTTTTATCGGCCGGCTNTCCCCACAAGCCATGTTTCTGCTTTTCGGCCTTCTCCTCGCTCTCCAATTTTTTATAACCATTTTGGTTCGCGAGAGCTCTCTTGGACTCCCAAAGAATCCATCTGTTGGGATAAGGAAACAGCTTTCGGAGCTATCAGTCGCTCTAAGAAAACCAGAAATCGCCTATTCGATATCATGGTTTGCAGCATCCTATGCCATCATTCCTGCACTTACAGGCACCATGTTCTTTTACCAGACACAGTATTTGAAAATTGACTCATCAGTGCTGGGAATCTCCAAGGTGTTTGGTCAGGCAACAATGCTTCTATGGGGCATAGTGTATAACCAATACCTGAAATCTGTCCCACCAAGGAAACTGATATCAGCCATTCAAGCCACGATGGCGATCTTCATGATCTCGGATTTCTTGTTCGTGCGAGGCGTATACAGACAAATGGGCGTGCCGGATTCGCTCTATGTTGTGATTTTCTCAGGATTCTTAGAGGTTCTGTTTTTCTTCAAGATTTTGCCATTCACTGTCTTAATAGCACAGCTTTGTCCACCAGGGTGTGAAGGGTCTATAATGGCATTTCTTATGTCTGCTGTGGCCCTGGCATTCATTGTGAGTGGATACCTTGGTGTTGCACTTGCATCATGCATCAAGATAACAGGAAGTGACTTCTCAGGACTCCCACTTGGTCTTCTGATACAAGCTGCATGCACTCTCTTGCCAATGTTTTGGTCATCATGCATACCTGAATATGTACAAATAAAAGACAAGAAGAAAGACTAGTAATATATTTAGCTTTTAGAAAAATGTGATAGTGACTNAAGGAGATGGCGGTGTGATGCTGAAGCAATTGATTCTGTTTATATCAATTCCATTCAGTGGCTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00005	534779	538034	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006810 transport

cellular_component
GO:0016021 integral component of membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000005s00001092.1	PF03092.11	BT1	30	432	1.50E-89

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.217
SRR1783600	control	2.258
SRR1783602	moderate drought stress	2.587
SRR1811619	moderate drought stress	2.422

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.541
DRR006520	Root Summer glycyrrhizin high producing strain	7.517
DRR006521	Root Winter glycyrrhizin high producing strain	4.663
DRR006522	Root Winter glycyrrhizin high producing strain	4.742
DRR006523	Root Summer glycyrrhizin low producing strain	4.548
DRR006524	Root Summer glycyrrhizin low producing strain	4.316
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.272
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.267

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.385
SRR2868004	Drought Stress (root)	4.948
SRR2967015	Control (root)	3.888

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.992
SRR9715740	Leaf	3.167
SRR9715741	Leaf	2.665
SRR9715739	Root	3.175
SRR9715742	Root	4.653
SRR9715743	Root	3.484

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.657
SRR8749028	MeJA induced 9h	4.581
SRR8749029	MeJA induced 9h	1.402
SRR8749030	Uninduced	0.817
SRR8749031	Uninduced	0.190
SRR8749032	Uninduced	0.362

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.969
SRR8400027	Control - Root	4.446