Gene detail

Gene detail information of Glyur000005s00001087

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G05160.1	0	cytochrome P450, family 88, subfamily A, polypeptide 3
NR	KEH37116.1	0	cytochrome P450 family ent-kaurenoic acid oxidase [Medicago truncatula]
COG	YP_007123031.1	1.00E-67	cytochrome P450 [Microcoleus sp. PCC 7113]
Swissprot	tr\|Q9C5Y2\|KAO2_ARATH	0	Ent-kaurenoic acid oxidase 2
trEMBL	tr\|A0A072V662\|A0A072V662_MEDTR	0	Cytochrome P450 family ent-kaurenoic acid oxidase {ECO:0000313\|EMBL:KEH37116.1}

Sequence

Transcript Sequence

>Glyur000005s00001087.1
CACTAATGTCTTAAAATTCCCTTTTGTTTTTATCTTTTTTATTCCTATTCATTCCCCCCTCTTTACATTATCTCTCACTCTTACTACATCTCTCCCACCCAACCCAAGTTTTCTTTATAAATACATAGAAAGAGAGTGAGGGACATGTTCTTGAGTTGAGTGAGTGGTGAGTAGTCACTGTTGTGGGAGTGGGAGTGAGAGTGTGGGTTGAAGTTAATTTGTGATGGTGATGGAGATGGGTTCCATGTGGGTGGTCCTGATGGCCATTGCTGCAGNTGCCCTTTTGGTCCTAAGATCCCTCCTCAAGAATGTAAATTGGTGGCTCTATGAGTCCAAATTGGGTGTGAAGCAGTACTCTCTGCCCCCAGGTGACATGGGGTGGCCCTTCATTGGCAACATGTGGTCCTTCCTCAGAGCTTTCAAGTCCAGGGACCCTGATTCCTTCATCTCCTCCTTTGTCTCCAGATATGGACGTACTGGAATGTATAAAGTCTTGATGTTTGGAAACCCAAGTGTTATTGTGACAACACCTGAAGCATGCAGAAGAGTTCTAACAGATGATGATAAATTTATACCTGGTTGGCCTCAGTCTTCAATAGAGCTTATCGGAAAGAGCTCGTTCATTGCAATGGCCTATGATGAACACAAGCGCCTTAGGCGTTTGACATCATCTTCAATCAATGGCATGGAAGCACTGTCCATGTACTTGACATACATTGAAGAAAATGTGACCAGTTCATTGGAGAAATGGGCAAACATGGGACAGATTGAGTTTCTGACCGAGATCCGGAAGCTTACTTTCAAAATCATCATGCATATTTTCCTTAGCTCGGAAAGCGAACCTGTCATGGAGGCTTTGGAAAAAGAATACACAACACTTAACCATGGAGTTAGAGCCATGCAGATAAATATTCCTGGATTTGCATACCATAAGGCATTGAAGGCAAGAAAAAATCTAGTTTCCATATTTCAATCTATTGTGGATGAGAGAAGAAACAGAAGGAAAGGAGATCTACCCAAGAAAGCCAAAGATATGATGGATTCTCTGATAGATGTTGAAGATGATAATGGAAGAAAGTTGAGTGATGAAGTTATCATTGATGTAATGTTGATGTACCTGAATGCGGGTCATGAGTCTTCAGGACATATTACCATGTGGGCNACCTATTTCCTGCAAAAGCATCCAGAATATCTTCAAAAGGCTAAGGCAGAACAAGAAGAAATAATAAAGAGAAGGCCTCCAACACAGAAAGGGTTGACACTCAAGGAAATTCGCGAGATGGATTTTCTTTATAAGGTGATTGATGAAACTTTGCGTGTGATAACATTCTCACTGGTGGTCTTTCGAGAGGCAAAATCTGATGTCAATATCAGTGGTTACACCATTCCGAAAGGTTGGAAAGCGCTTGTGTGGTTCAGGTCGGTTCACCTTGATCCTGAAATTTATCCTAATCCAAAGGAATTTAATCCTAATAGATGGAATAAGGAGCACAAGGCCGGGGAATTCCTTCCCTTTGGGGCAGGAAGTAGATTGTGTCCTGGCAATGATCTTGCCAAGATGGAAATTGCAGTTTTTCTTCATCACTTCCTTCTAAATTATCAGCTTGAACAGCTTAATCCTAAATGCTGTGTGAGATACTTACCGCATACAAGGCCCATGGACAATTGCTTAGGAAGGGTCAAGAAATGTTCATCTTCGTCAACATAAAATGGAGGAGANAGAGCACATACATGACTATGGCTCTTTGTAATTGTAATATGAAAATCAATCTTCATGTTTGCCATCGGATAAATGCACAAACCCCAAGCTACTTTGAGCTATGTTGTCATAGTTAAAAAAAAAAAAAGTTTAGGAAGTTTTACAACCCTATACAAATAAGAAATAAGTATAATTCCCAAATCTCCATTACCACCATTTAGGCAGTAGCTAGTAAGTCATCCATCTAGTCCAAATNTTCTGATAAATGGACAAAAATAACCTTTGTTTCATTAGGCTACTCATTCAAAGAAAGAATCTAGTTTCTGGTTAGTTGATCGATGTGTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00005	505447	511675	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP88A3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K04123	KAO	EC:1.14.13.79	Diterpenoid biosynthesis	map00904

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000005s00001087.1	PF00067.17	p450	47	462	2.10E-66

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.048
SRR1783600	control	1.110
SRR1783602	moderate drought stress	3.349
SRR1811619	moderate drought stress	3.381

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.497
DRR006520	Root Summer glycyrrhizin high producing strain	4.254
DRR006521	Root Winter glycyrrhizin high producing strain	2.581
DRR006522	Root Winter glycyrrhizin high producing strain	2.606
DRR006523	Root Summer glycyrrhizin low producing strain	2.316
DRR006524	Root Summer glycyrrhizin low producing strain	2.364
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.123
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.075

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.441
SRR2868004	Drought Stress (root)	10.511
SRR2967015	Control (root)	10.330

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.196
SRR9715740	Leaf	3.856
SRR9715741	Leaf	3.469
SRR9715739	Root	0.304
SRR9715742	Root	2.686
SRR9715743	Root	3.486

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.978
SRR8749028	MeJA induced 9h	0.654
SRR8749029	MeJA induced 9h	0.297
SRR8749030	Uninduced	0.104
SRR8749031	Uninduced	0.037
SRR8749032	Uninduced	0.599

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.411
SRR8400027	Control - Root	5.740