Gene detail

Gene detail information of Glyur000005s00001083

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G12380.1	1.00E-105	annexin 8
NR	KEH37119.1	3.71E-177	annexin D8 [Medicago truncatula]
COG	YP_007143024.1	2.00E-47	short-chain dehydrogenase/reductase SDR [Crinalium epipsammum PCC 9333]
Swissprot	tr\|Q94CK4\|ANXD8_ARATH	2.00E-127	Annexin D8
trEMBL	tr\|A0A072V514\|A0A072V514_MEDTR	1.00E-177	Annexin D8 {ECO:0000313\|EMBL:KEH37119.1}

Sequence

Transcript Sequence

>Glyur000005s00001083.1
CAATTGTGAAATGTGTTTGTTTGTCACGAACAACATACAACAATNACTAATCGCAGCATTTGTTGGTGTGTTTGTGAATTTGCATTCTTTTCTTGGTTACTAGCTTGCCACGCTTCATGTTCATGCCATTGGGTCTNCCCCATCCATCACCAATAGATAAATAGAAGAGCTTTCTTTTTCTTTCATGTGATGCTGCTATAATGCTATTGTTGCCACCCACCCACAACACTTCCATGGCATCACATTCGACGCGGCTTCTATCACTTACCCGAAGGGCCTTTTCTTCTTCCTCTTCTCAAGCTGCTGGGGTTTCCATGGTTCAAGGAGCTTCCAGAGGAATCGGCCTTGAATTTGTGAAACAGCTGCTAGAGGNCAATGATAAAGGGCATGTTATTGCTACTTGCCGTAATCCAAGTGCTTCAACTGGGCTTATCCACCTGAAAGATAAATTTGCTGATCGTCTTAAAATCCTGCAGTTGGATTTGACTACCTTGAGCATAAAGGGTATTGTCAAGGTAGAATCAACAAATGTAGTGGCCTTTTCTATCAAGACTGATGCATCTGCATCGTCCATAAAAGAGACATATGGCCATTTAAACCTTCTCATTAATGCATCTGGCATTCTTTCAATACCTAAAGTATTGCAACCAGATGATTATATTAGTTATCTATACAATACAGAAACAACATTGAACAAATTGGAGAAGTCATCTTTAATGCTTGCATATGAGGTTAATGCTGTGGGTCCTATCCTAGTTATCAAGCACATGTGGCCTCTTCTAAAAGTTGGAGGTGGCAATGGGACTGAAAGAAGTGCTGCAGTTGTGGCTAGTTTGAGTGCAAGGGTTGCATCTATTGGGGACAATCGTCTTGGGGGTTGGCACTCTTATCGATCTTCAAAGGCTGCTCTTAATCAATTTGACACAGATCTTTCTAGGCCATTTCAAAGAAATGTTCCCAAAGACAAGCTCTTCAGCAAAGAGTTCTCAGTCCAAAAGCTGCTAAACATCATTAACAATGNGAAGAGCCATGACAATGGCAAGTTCTTTGCCTGGGATGGTCAAGAAATTCCTTGTAAAGTGAAAATGAAAAACAACTCTTGCGCAAATCTTGTCTTGGCACTAAAGAAACAAAACCAAATGGCTACTCTAATTGCTGCAAAAGATTTTTCTCCAATTGAAGACGCTGAAACTATCAAGAGAGCATGCAAAGGATTGGGGACAAATGAGACAGNGCTTATATCCACACTAGCACAGAGAAATGAAGCTCAAAGGAAACTTGTGAGGCTGGCTTATGAAGAAATTTATCATCAGGATCTTATCCAACAACTCAAATNTGAACTTTCAGGAAACTTTGAGAGAGCTATTTGCTATTGGACGATGGATCCAGCTGAAAGAGATGCTACATTTATTAACGAGGCATTAAAGAAGGAAACACCAGATTACAAAGTAATTATTGAGATTGCTTCCACTAGAACTTCANAAGAGCTTCTGGCTGTAAAGCGCTCATACCAATTTCTATACAAGCATTGCCTTGAAGAAGATTTGGCCTCCCAAACAACTGGTGATATTCGCAAATTGTTGGTTGCAGTTATAAGCACTTACAGGTATGAGGGAGATGAGTTTGATGAGAATATGGCCTATTCAGAAGCAAACATACTTAATCAATTAATGGGAAAGAAGGCTTTTAACGATGATGAAATCATTAGAATTTTAAGTACAAGNAGTAAGAAGCAGCTATGTGTGACTTTCAATGTCTTTAGGGACATGTATGGCACAACAATNACCAGGGGATTATTGGCTAGTCCAATTGATGAATACATAGGAGCACTGCGTACTACCCTTCGTTGCATTAAGAACACCCAGAGATACTTCGCCAAGGTGTTATGTCACGCCTTGAATGATTTGGCAACCGAANATCATGCTTTGAGCCGTGTTATCATCACTCGTGCAGAGAAGGATTTAAAGGAAATCAATGACCTTTATTTAAAGAGAAACAATGTCACCCTTGTTGATTCCGTGGCTAGAAAGACATGGGGAAATTACAAGACTTTTCTCCTTGCCTTGTTGGGAAACNAATAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00005	483367	490387	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0005509 calcium ion binding

GO:0005544 calcium-dependent phospholipid binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000005s00001083.1	PF00191.15	Annexin	327	390	3.20E-18
Glyur000005s00001083.1	PF00191.15	Annexin	400	463	1.30E-14
Glyur000005s00001083.1	PF00191.15	Annexin	483	526	4.20E-07
Glyur000005s00001083.1	PF00191.15	Annexin	557	622	2.90E-10

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.166
SRR1783600	control	0.158
SRR1783602	moderate drought stress	0.402
SRR1811619	moderate drought stress	0.353

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.788
DRR006520	Root Summer glycyrrhizin high producing strain	0.674
DRR006521	Root Winter glycyrrhizin high producing strain	0.107
DRR006522	Root Winter glycyrrhizin high producing strain	0.136
DRR006523	Root Summer glycyrrhizin low producing strain	0.545
DRR006524	Root Summer glycyrrhizin low producing strain	0.557
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.463
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.476

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	3.209
SRR2868004	Drought Stress (root)	3.332
SRR2967015	Control (root)	3.946

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.154
SRR9715740	Leaf	6.473
SRR9715741	Leaf	4.085
SRR9715739	Root	0.032
SRR9715742	Root	0.514
SRR9715743	Root	0.604

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.190
SRR8749028	MeJA induced 9h	4.201
SRR8749029	MeJA induced 9h	2.261
SRR8749030	Uninduced	2.128
SRR8749031	Uninduced	1.039
SRR8749032	Uninduced	1.128

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.706
SRR8400027	Control - Root	2.809