Gene detail information of Glyur000005s00001040 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G47980.1 | 4.00E-106 | |
| NR | KHN24847.1 | 6.15E-173 | Desiccation-related protein PCC13-62 [Glycine soja] |
| Swissprot | tr|P22242|DRPE_CRAPL | 9.00E-120 | Desiccation-related protein PCC13-62 (Precursor) |
| trEMBL | tr|K7MB89|K7MB89_SOYBN | 4.00E-173 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G14720.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00005 | 209355 | 211287 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000005s00001040.1 | PF13668.1 | Ferritin_2 | 44 | 211 | 3.30E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.782 |
| SRR1783600 | control | 20.823 |
| SRR1783602 | moderate drought stress | 10.470 |
| SRR1811619 | moderate drought stress | 11.970 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.212 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.390 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.590 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 28.180 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.325 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.328 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.157 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 324.610 |
| SRR2868004 | Drought Stress (root) | 164.345 |
| SRR2967015 | Control (root) | 146.839 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.085 |
| SRR9715740 | Leaf | 0.442 |
| SRR9715741 | Leaf | 0.394 |
| SRR9715739 | Root | 121.049 |
| SRR9715742 | Root | 89.799 |
| SRR9715743 | Root | 92.685 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.251 |
| SRR8749028 | MeJA induced 9h | 86.831 |
| SRR8749029 | MeJA induced 9h | 18.016 |
| SRR8749030 | Uninduced | 34.404 |
| SRR8749031 | Uninduced | 9.903 |
| SRR8749032 | Uninduced | 15.433 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 76.135 |
| SRR8400027 | Control - Root | 65.188 |