Gene detail information of Glyur000005s00001036 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17130.1 | 4.00E-30 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| NR | NP_001238267.1 | 1.78E-94 | uncharacterized protein LOC100527840 precursor [Glycine max] |
| trEMBL | tr|C6T5K9|C6T5K9_SOYBN | 7.00E-95 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G03850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00005 | 193047 | 193631 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000005s00001036.1 | PF04043.10 | PMEI | 45 | 187 | 8.60E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.936 |
| SRR1783600 | control | 4.994 |
| SRR1783602 | moderate drought stress | 2.396 |
| SRR1811619 | moderate drought stress | 2.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.531 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.176 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 51.980 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 50.006 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.354 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.517 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.630 |
| SRR2868004 | Drought Stress (root) | 0.856 |
| SRR2967015 | Control (root) | 1.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.114 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 3.573 |
| SRR9715742 | Root | 2.797 |
| SRR9715743 | Root | 2.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.078 |
| SRR8749028 | MeJA induced 9h | 0.344 |
| SRR8749029 | MeJA induced 9h | 0.343 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.740 |
| SRR8400027 | Control - Root | 12.972 |