Gene detail information of Glyur000005s00001035 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17120.2 | 4.00E-18 | |
| NR | XP_003533137.1 | 3.95E-113 | PREDICTED: uncharacterized protein LOC100778592 isoform X1 [Glycine max] |
| trEMBL | tr|I1L0P4|I1L0P4_SOYBN | 1.00E-113 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G03860.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00005 | 187142 | 190898 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.832 |
| SRR1783600 | control | 5.824 |
| SRR1783602 | moderate drought stress | 3.090 |
| SRR1811619 | moderate drought stress | 3.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.971 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.716 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.920 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.758 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.970 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.944 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.098 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.886 |
| SRR2868004 | Drought Stress (root) | 10.845 |
| SRR2967015 | Control (root) | 8.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.712 |
| SRR9715740 | Leaf | 5.484 |
| SRR9715741 | Leaf | 6.242 |
| SRR9715739 | Root | 9.828 |
| SRR9715742 | Root | 11.581 |
| SRR9715743 | Root | 12.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.730 |
| SRR8749028 | MeJA induced 9h | 51.988 |
| SRR8749029 | MeJA induced 9h | 30.630 |
| SRR8749030 | Uninduced | 60.009 |
| SRR8749031 | Uninduced | 76.089 |
| SRR8749032 | Uninduced | 65.278 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.787 |
| SRR8400027 | Control - Root | 17.185 |