Gene detail information of Glyur000005s00001026 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003547354.2 | 8.49E-25 | PREDICTED: probable WRKY transcription factor 48-like [Glycine max] |
| trEMBL | tr|I1MGD4|I1MGD4_SOYBN | 2.00E-25 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G14860.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00005 | 149720 | 152528 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 60.550 |
| SRR1783600 | control | 60.557 |
| SRR1783602 | moderate drought stress | 57.122 |
| SRR1811619 | moderate drought stress | 57.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 49.169 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 47.848 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 46.020 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 44.498 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 113.452 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 112.563 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.832 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.648 |
| SRR2868004 | Drought Stress (root) | 3.998 |
| SRR2967015 | Control (root) | 4.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.790 |
| SRR9715740 | Leaf | 16.128 |
| SRR9715741 | Leaf | 29.257 |
| SRR9715739 | Root | 18.887 |
| SRR9715742 | Root | 24.677 |
| SRR9715743 | Root | 22.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.003 |
| SRR8749028 | MeJA induced 9h | 48.909 |
| SRR8749029 | MeJA induced 9h | 71.394 |
| SRR8749030 | Uninduced | 41.560 |
| SRR8749031 | Uninduced | 21.518 |
| SRR8749032 | Uninduced | 13.593 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.933 |
| SRR8400027 | Control - Root | 19.102 |