Gene detail information of Glyur000005s00001022 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17100.2 | 2.00E-35 | sequence-specific DNA binding transcription factors |
| NR | XP_003546309.1 | 4.87E-91 | PREDICTED: transcription factor bHLH147-like [Glycine max] |
| Swissprot | tr|Q9LSN7|BH147_ARATH | 3.00E-49 | Transcription factor bHLH147 |
| trEMBL | tr|I1MGD6|I1MGD6_SOYBN | 2.00E-91 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G14890.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00005 | 112367 | 113035 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 93.058 |
| SRR1783600 | control | 92.682 |
| SRR1783602 | moderate drought stress | 184.756 |
| SRR1811619 | moderate drought stress | 183.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 124.709 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 123.895 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 35.627 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 34.455 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 132.274 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 135.630 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 46.334 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 48.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 127.120 |
| SRR2868004 | Drought Stress (root) | 115.227 |
| SRR2967015 | Control (root) | 160.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 44.087 |
| SRR9715740 | Leaf | 56.647 |
| SRR9715741 | Leaf | 41.715 |
| SRR9715739 | Root | 199.084 |
| SRR9715742 | Root | 195.246 |
| SRR9715743 | Root | 184.857 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 129.419 |
| SRR8749028 | MeJA induced 9h | 67.537 |
| SRR8749029 | MeJA induced 9h | 126.607 |
| SRR8749030 | Uninduced | 101.921 |
| SRR8749031 | Uninduced | 18.863 |
| SRR8749032 | Uninduced | 63.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 116.384 |
| SRR8400027 | Control - Root | 125.819 |