Gene detail information of Glyur000004s00000511 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G59350.1 | 3.00E-31 | |
| NR | XP_004487018.1 | 1.12E-147 | PREDICTED: uncharacterized protein LOC101511700 [Cicer arietinum] |
| trEMBL | tr|V7BWC5|V7BWC5_PHAVU | 2.00E-146 | Uncharacterized protein {ECO:0000313|EMBL:ESW22307.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 806607 | 807557 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.192 |
| SRR1783600 | control | 20.354 |
| SRR1783602 | moderate drought stress | 22.954 |
| SRR1811619 | moderate drought stress | 21.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 72.809 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 69.488 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.736 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.486 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 189.104 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 188.845 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.597 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.860 |
| SRR2868004 | Drought Stress (root) | 18.003 |
| SRR2967015 | Control (root) | 25.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.650 |
| SRR9715740 | Leaf | 23.456 |
| SRR9715741 | Leaf | 19.961 |
| SRR9715739 | Root | 53.036 |
| SRR9715742 | Root | 102.304 |
| SRR9715743 | Root | 95.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 106.084 |
| SRR8749028 | MeJA induced 9h | 185.128 |
| SRR8749029 | MeJA induced 9h | 121.087 |
| SRR8749030 | Uninduced | 221.834 |
| SRR8749031 | Uninduced | 136.273 |
| SRR8749032 | Uninduced | 120.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.741 |
| SRR8400027 | Control - Root | 34.693 |