Gene detail information of Glyur000004s00000506 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN33390.1 | 7.37E-25 | hypothetical protein glysoja_005432 [Glycine soja] |
| trEMBL | tr|K7M9F4|K7M9F4_SOYBN | 2.00E-24 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G04383.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 770434 | 771027 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.767 |
| SRR1783600 | control | 8.466 |
| SRR1783602 | moderate drought stress | 6.000 |
| SRR1811619 | moderate drought stress | 6.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.535 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.470 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.678 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.792 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.494 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.456 |
| SRR2868004 | Drought Stress (root) | 16.915 |
| SRR2967015 | Control (root) | 23.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.599 |
| SRR9715740 | Leaf | 26.751 |
| SRR9715741 | Leaf | 8.993 |
| SRR9715739 | Root | 10.046 |
| SRR9715742 | Root | 5.445 |
| SRR9715743 | Root | 4.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.186 |
| SRR8749028 | MeJA induced 9h | 0.866 |
| SRR8749029 | MeJA induced 9h | 0.764 |
| SRR8749030 | Uninduced | 0.555 |
| SRR8749031 | Uninduced | 1.102 |
| SRR8749032 | Uninduced | 0.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.987 |
| SRR8400027 | Control - Root | 29.221 |