Gene detail information of Glyur000004s00000503 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G46540.1 | 7.00E-50 | ENTH/VHS family protein |
| NR | KHN30174.1 | 1.01E-152 | Epsin-2 [Glycine soja] |
| trEMBL | tr|I1MDF6|I1MDF6_SOYBN | 1.00E-153 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G04340.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 751179 | 752723 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000004s00000503.1 | PF01417.15 | ENTH | 44 | 115 | 2.20E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.415 |
| SRR1783600 | control | 0.359 |
| SRR1783602 | moderate drought stress | 0.204 |
| SRR1811619 | moderate drought stress | 0.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.171 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.556 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.437 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.450 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.185 |
| SRR2868004 | Drought Stress (root) | 11.687 |
| SRR2967015 | Control (root) | 14.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.240 |
| SRR9715740 | Leaf | 12.145 |
| SRR9715741 | Leaf | 17.453 |
| SRR9715739 | Root | 0.196 |
| SRR9715742 | Root | 0.785 |
| SRR9715743 | Root | 0.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.973 |
| SRR8749028 | MeJA induced 9h | 11.980 |
| SRR8749029 | MeJA induced 9h | 2.859 |
| SRR8749030 | Uninduced | 11.323 |
| SRR8749031 | Uninduced | 5.357 |
| SRR8749032 | Uninduced | 4.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.562 |
| SRR8400027 | Control - Root | 1.583 |