Gene detail information of Glyur000004s00000486 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07540.1 | 1.00E-90 | TRF-like 2 |
| NR | AES67615.2 | 0 | double-strand telomere-binding protein, putative [Medicago truncatula] |
| Swissprot | tr|Q6R0E3|TRP5_ARATH | 1.00E-137 | Telomere repeat-binding protein 5 |
| trEMBL | tr|G7IHQ2|G7IHQ2_MEDTR | 0 | Double-strand telomere-binding protein, putative {ECO:0000313|EMBL:AES67615.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 653843 | 659918 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.166 |
| SRR1783600 | control | 23.554 |
| SRR1783602 | moderate drought stress | 26.443 |
| SRR1811619 | moderate drought stress | 26.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.154 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.769 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 35.292 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 34.166 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.637 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.315 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.451 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.104 |
| SRR2868004 | Drought Stress (root) | 25.905 |
| SRR2967015 | Control (root) | 36.685 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.313 |
| SRR9715740 | Leaf | 5.432 |
| SRR9715741 | Leaf | 5.694 |
| SRR9715739 | Root | 4.643 |
| SRR9715742 | Root | 22.502 |
| SRR9715743 | Root | 21.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.345 |
| SRR8749028 | MeJA induced 9h | 29.510 |
| SRR8749029 | MeJA induced 9h | 12.981 |
| SRR8749030 | Uninduced | 4.695 |
| SRR8749031 | Uninduced | 3.586 |
| SRR8749032 | Uninduced | 4.431 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 45.050 |
| SRR8400027 | Control - Root | 39.689 |