Gene detail information of Glyur000004s00000471 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G29180.1 | 4.00E-08 | |
| NR | XP_004486983.1 | 2.64E-41 | PREDICTED: uncharacterized protein LOC101501532 [Cicer arietinum] |
| trEMBL | tr|M5W0N0|M5W0N0_PRUPE | 4.00E-37 | Uncharacterized protein {ECO:0000313|EMBL:EMJ07274.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 549401 | 550622 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.927 |
| SRR1783600 | control | 3.912 |
| SRR1783602 | moderate drought stress | 2.200 |
| SRR1811619 | moderate drought stress | 2.379 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.757 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.075 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.651 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.650 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.923 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.935 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.684 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.135 |
| SRR2868004 | Drought Stress (root) | 6.973 |
| SRR2967015 | Control (root) | 7.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.648 |
| SRR9715740 | Leaf | 17.033 |
| SRR9715741 | Leaf | 15.597 |
| SRR9715739 | Root | 0.990 |
| SRR9715742 | Root | 2.192 |
| SRR9715743 | Root | 1.976 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.272 |
| SRR8749028 | MeJA induced 9h | 2.312 |
| SRR8749029 | MeJA induced 9h | 1.260 |
| SRR8749030 | Uninduced | 1.026 |
| SRR8749031 | Uninduced | 0.239 |
| SRR8749032 | Uninduced | 0.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.164 |
| SRR8400027 | Control - Root | 7.879 |