Gene detail information of Glyur000004s00000470 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G59610.1 | 7.00E-63 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_006597060.1 | 8.17E-137 | PREDICTED: uncharacterized protein LOC100812972 isoform X1 [Glycine max] |
| COG | YP_002522656.1 | 5.00E-16 | chaperone protein DnaJ [Thermomicrobium roseum DSM 5159] |
| Swissprot | tr|Q38813|DNAJ1_ARATH | 2.00E-12 | Chaperone protein dnaJ 1, mitochondrial (Precursor) |
| trEMBL | tr|K7M9D2|K7M9D2_SOYBN | 3.00E-137 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G04040.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 545125 | 549062 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000004s00000470.1 | PF00226.26 | DnaJ | 98 | 157 | 3.80E-24 |
| Glyur000004s00000470.2 | PF00226.26 | DnaJ | 98 | 157 | 3.60E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.135 |
| SRR1783600 | control | 5.134 |
| SRR1783602 | moderate drought stress | 3.849 |
| SRR1811619 | moderate drought stress | 3.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.676 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.583 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.851 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.828 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.736 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.773 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 51.389 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 51.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.918 |
| SRR2868004 | Drought Stress (root) | 14.819 |
| SRR2967015 | Control (root) | 12.995 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 50.440 |
| SRR9715740 | Leaf | 75.852 |
| SRR9715741 | Leaf | 53.005 |
| SRR9715739 | Root | 1.086 |
| SRR9715742 | Root | 2.899 |
| SRR9715743 | Root | 1.686 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.436 |
| SRR8749028 | MeJA induced 9h | 16.342 |
| SRR8749029 | MeJA induced 9h | 12.353 |
| SRR8749030 | Uninduced | 9.165 |
| SRR8749031 | Uninduced | 2.802 |
| SRR8749032 | Uninduced | 4.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.849 |
| SRR8400027 | Control - Root | 9.465 |