Gene detail information of Glyur000004s00000468 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G46750.1 | 3.00E-08 | |
| NR | KHN30146.1 | 8.68E-92 | hypothetical protein glysoja_010524 [Glycine soja] |
| trEMBL | tr|K7M3G2|K7M3G2_SOYBN | 5.00E-92 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G41380.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 534325 | 537870 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.921 |
| SRR1783600 | control | 2.000 |
| SRR1783602 | moderate drought stress | 6.927 |
| SRR1811619 | moderate drought stress | 6.989 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.462 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.204 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.253 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.400 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.026 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.659 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.287 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.358 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.592 |
| SRR2868004 | Drought Stress (root) | 1.115 |
| SRR2967015 | Control (root) | 0.900 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.064 |
| SRR9715740 | Leaf | 0.424 |
| SRR9715741 | Leaf | 0.147 |
| SRR9715739 | Root | 0.091 |
| SRR9715742 | Root | 1.345 |
| SRR9715743 | Root | 1.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.046 |
| SRR8749028 | MeJA induced 9h | 0.385 |
| SRR8749029 | MeJA induced 9h | 0.977 |
| SRR8749030 | Uninduced | 0.330 |
| SRR8749031 | Uninduced | 0.500 |
| SRR8749032 | Uninduced | 0.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.453 |
| SRR8400027 | Control - Root | 0.176 |