Gene detail information of Glyur000004s00000462 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003550261.1 | 1.62E-21 | PREDICTED: uncharacterized protein LOC100817633 [Glycine max] |
| trEMBL | tr|I1MX80|I1MX80_SOYBN | 6.00E-22 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G34370.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 512959 | 513973 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 151.772 |
| SRR1783600 | control | 151.521 |
| SRR1783602 | moderate drought stress | 71.038 |
| SRR1811619 | moderate drought stress | 68.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 446.067 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 447.129 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.980 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.452 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 116.942 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 127.760 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.537 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.976 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 41.198 |
| SRR2868004 | Drought Stress (root) | 8.398 |
| SRR2967015 | Control (root) | 35.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.412 |
| SRR9715740 | Leaf | 0.841 |
| SRR9715741 | Leaf | 0.228 |
| SRR9715739 | Root | 55.694 |
| SRR9715742 | Root | 15.585 |
| SRR9715743 | Root | 21.640 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.100 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 89.734 |
| SRR8400027 | Control - Root | 87.851 |