Gene detail

Gene detail information of Glyur000004s00000457

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G59020.1	4.00E-66	Protein of unknown function (DUF3527)
NR	XP_004486974.1	0	PREDICTED: uncharacterized protein LOC101498980 isoform X1 [Cicer arietinum]
trEMBL	tr\|G7IRZ2\|G7IRZ2_MEDTR	0	DUF3527 domain protein {ECO:0000313\|EMBL:AES67665.1}

Sequence

Transcript Sequence

>Glyur000004s00000457.1
GCATTGGAGTTTGAGGAATTGATTCGAGGACGACACTACTACTACTACTACAAGTGTTTTACAATCCGTGTTTGCGTTTTGGGGTTGCTCGCCACACACTTACTTCACTCTCTTGTTGCGACGTCGTTTTCCAACCAAACTACGGCACCGACACTCCTTGCTTCCTTCTTCTCCAAGCGAGGGGGACCCTCAGTTCCCTTGCGTTTCTCGCTTCTGCACCATTCCTCTCCGCTTCTCCGCTGGAAAACAAGCAGTAGTATTTTCCCAACTGAAATCTCTCTGGAAGACAGAAAGGTGAGACTGAAAGCCAGGAAGCTATCCACCACCATGAGTAGAAAACCTAGTGATGGGNTAAAACCAGAGAAGTCTCCTTTTTCATATGCTGATCTTCATCATGAAATTACCAAAAGTGAGGTGGGAAACTCTTTAAAATCTTTTGAAAATCAACAAAAGCAAGCGACTTGTAGAAGGGCAAGTGAGGAAGAAGAGCTGGTTAAGTACATGTCAAAACTACCAGGTTATTTGGAGAGGGGAGAAAAAATTCCTGATAAAGTTTTGAATGTTGGGGTCCTTGATTGGGCCAGTCTAGAACAATGGCAGTACAGCCATAAACACGTACCGCACATAAGTAGCCAGAGCTCGACATCTTCTAGCTCTAGTAATACATCATCTTCTGTTCCTATAGAGGAATTATCTGGTAATTTTAGCNGGCGTCTAAATTGGTCTCCTTCTCATGAAAGGAATATCCGTCCGTCACTGCAATCTCACTTTATGGCATCTTCAATGCAAGACCGCTCTACAGCTGTCAAATCCTCTGGAGGAAGAAGTGTGGGAAATAGTCAGAATCTTAGAGGTAGCCACGGTGATATTGACACACAGAGAAACCATGTTCGGACTGGTGATCATATTTCCCAAAACCTTCCTGCTAGTATACTGAAAGGACGTGACAGGAAACATCTAATCCCACATATTAATAAGGAAAGTAATGTCTTGCCAAATGACCAAATTTATGAGGCAGCATCATTTGCTAAGATGGAAATGAGCACTCAAGATGGCCAAATGGAAAAGAAAGTGGAGAACTTAAAAGCACAAAATATTGGTACTGTTGCTGATGAGCAAGATATGCTTGGGAAAAGTAAACCAATTGTTCTTATCTTGCCTAGAGACATCCCTCAGAACAATCATTGTGGTGCTCCTGACATGCAAACATCCTTGGATCAAAAGTTAGGAAGCCCTAGNCGAACAAGATTTTCAGTAGAACCTAAGGAACCTTCCTGTGGATATCCGAATTGCAATATTTCATACTCCTGTCCTCGGCCAGATGAACTTAGTGAAAGCCATACTCATCCTAAAGAGTCAGGATCCAGTTCCATAGATCCAGAAAGTTTCAAAATCCCTGCTTCTACTTTATCAGCACCCCGACTGGCCAGAATGGGAGTAAGTCCATGCAGATCTAGAAAGGCCGAGGAAAGGAAACACACCATTGCTGTATCTTCATCTGCAATTGGGCCTCCCAAGGGATTAAACCCGAAAGTAACTACTGAGAAATCAAGAAGCTCTTCACCTTTCCGTCGATTTAACTTCAGCATTGGCATAACAAGTAAAGGTCCTGGCTGTAAAGAGGTTGCGCATGTGCCACATCAGAGCTCCATAGCTGCACTTAAATCTAGTTCAGAAAATGTGAGAGGTTATGCTAGCTCAAACATTTCAGGCAATGATAAACCTGGTGATGCTGGCAGAAGCAGGTCCAGCCCTTTGAGGAGATTTATTGATCCACTGGTGAAACCAAAGGCAGCAAACTCCCATCACTCCATGGAGTTATCTCAAAAAGTTTCAGAAAATGTGAGAGGCTGTACTAGCTCAAACATTTCAGGCAATAAATCGGGCGATGCTGGCAGAAGCAGGTCCAGCCCTTTAAGGAGATTACTTGATCCACTGCTGAAACCAAAGGCAGCAAACTGCCATCACTCCATGAATTTGCTTCAAAAAGAGTCAGTGTTAACAAATAAGAATTGTAGGCCAGGTAATGGGAAATGTTCCACACTACTGCCAGAGAAAGAACTGGACAGGGACCAGAGGTTTGGTTGCTCTACAGTTAATACTGCTGATTCGGCAAAGGACAAGAGGTATGTGCCACCAATGTCTCAAGCTCTACTGAGAATTGCTGTGAAGAATGGTCAGCCCCTTTGTACATTTGCTGTTGACAACAACAGCAACATTCTCGCTGCCACAGCGAAGAACTTAACCGCCTCAAGACAAGATGAATGCAACCGTATCTATACCTTTTTCACCTTTAGGGAGGTTAAAAAGAAGAATGGAAGTTGGATGAATCAAGGAGGCAAAAGCAAAGGTCTTGATTACATTCGCCACGTCATTGCCCAAATGAAGGTTTCTGATGTGCACTATGATGATTCAGATAGCCAGAATCGTGTGGACTCCTCAGTTGCAAAAGAGTTCGTTTTGTTCTCAGTAAAGCTAAAGCAGGGAGATGCTCAGGTGACTGACTATCAGCCAAATGACGAGCTTGCTGCTATAGTTGCCAAATCGCCCAACGCTATCAATTTTGTCAATTATGCACATCAGAGCGGTTGCCAGAATGAATGTCAAGACCTTCTAAATATAACAGTGGTGCTTCCCAGTGGGGTTCACAGTCTTCCAAGTAATGGTGGACCTTCATCACTGATTGAGCGCTGGAAAACTGGTGGATCCTGTGACTGTGGTGGTTGGGATTTGGCTTGTAAACTAAAAATTCTTGCAAACAAAAATCAAGCGCGCAGAAAATCAATAACGTCGGAAGCTTATTTTGCAGACCGATATGAGCTTTCCCTCCAGGGGAATGACCAAGNCCAAGAGAACCGACCTGCTTTTAAATTTTCCCCATTTGAACCTGGAGTATATTCAGTAGCTTTTGATTCATCACTCTCACTTTTGCAAGCATTCTCCATCTGCATAGCGTTAGTGGATGGCAAGCTCCCATGTGGACTTTCTGGATCAAGAAACTCCATTGAAGTAAAAAACCAGAGGGAAACTCTATTGGTTAAAACAGACGAACTAAAGGATTTTGGTAAATTTGAGGACATTCCTGCAAGTTGCGTTGCTTATCCTCCGGTATCTCCAGCTGGTAGGGTCTAA

Protein Sequence

>Glyur000004s00000457.1
ALEFEELIRGRHYYYYYKCFTIRVCVLGLLATHLLHSLVATSFSNQTTAPTLLASFFSKRGGPSVPLRFSLLHHSSPLLRWKTSSSIFPTEISLEDRKVRLKARKLSTTMSRKPSDGXKPEKSPFSYADLHHEITKSEVGNSLKSFENQQKQATCRRASEEEELVKYMSKLPGYLERGEKIPDKVLNVGVLDWASLEQWQYSHKHVPHISSQSSTSSSSSNTSSSVPIEELSGNFSXRLNWSPSHERNIRPSLQSHFMASSMQDRSTAVKSSGGRSVGNSQNLRGSHGDIDTQRNHVRTGDHISQNLPASILKGRDRKHLIPHINKESNVLPNDQIYEAASFAKMEMSTQDGQMEKKVENLKAQNIGTVADEQDMLGKSKPIVLILPRDIPQNNHCGAPDMQTSLDQKLGSPXRTRFSVEPKEPSCGYPNCNISYSCPRPDELSESHTHPKESGSSSIDPESFKIPASTLSAPRLARMGVSPCRSRKAEERKHTIAVSSSAIGPPKGLNPKVTTEKSRSSSPFRRFNFSIGITSKGPGCKEVAHVPHQSSIAALKSSSENVRGYASSNISGNDKPGDAGRSRSSPLRRFIDPLVKPKAANSHHSMELSQKVSENVRGCTSSNISGNKSGDAGRSRSSPLRRLLDPLLKPKAANCHHSMNLLQKESVLTNKNCRPGNGKCSTLLPEKELDRDQRFGCSTVNTADSAKDKRYVPPMSQALLRIAVKNGQPLCTFAVDNNSNILAATAKNLTASRQDECNRIYTFFTFREVKKKNGSWMNQGGKSKGLDYIRHVIAQMKVSDVHYDDSDSQNRVDSSVAKEFVLFSVKLKQGDAQVTDYQPNDELAAIVAKSPNAINFVNYAHQSGCQNECQDLLNITVVLPSGVHSLPSNGGPSSLIERWKTGGSCDCGGWDLACKLKILANKNQARRKSITSEAYFADRYELSLQGNDQXQENRPAFKFSPFEPGVYSVAFDSSLSLLQAFSICIALVDGKLPCGLSGSRNSIEVKNQRETLLVKTDELKDFGKFEDIPASCVAYPPVSPAGRV

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00004	489945	494481	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000004s00000457.1	PF12043.3	DUF3527	714	828	2.60E-24
Glyur000004s00000457.1	PF12043.3	DUF3527	833	988	1.30E-46

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	15.270
SRR1783600	control	15.332
SRR1783602	moderate drought stress	18.547
SRR1811619	moderate drought stress	18.274

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.237
DRR006520	Root Summer glycyrrhizin high producing strain	11.167
DRR006521	Root Winter glycyrrhizin high producing strain	0.576
DRR006522	Root Winter glycyrrhizin high producing strain	0.598
DRR006523	Root Summer glycyrrhizin low producing strain	9.763
DRR006524	Root Summer glycyrrhizin low producing strain	9.748
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.944
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.749

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	10.433
SRR2868004	Drought Stress (root)	10.530
SRR2967015	Control (root)	11.005

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.131
SRR9715740	Leaf	9.663
SRR9715741	Leaf	5.756
SRR9715739	Root	2.587
SRR9715742	Root	10.944
SRR9715743	Root	9.164

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.804
SRR8749028	MeJA induced 9h	4.659
SRR8749029	MeJA induced 9h	3.564
SRR8749030	Uninduced	0.608
SRR8749031	Uninduced	0.079
SRR8749032	Uninduced	0.158

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	9.183
SRR8400027	Control - Root	10.323