Gene detail information of Glyur000004s00000456.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G59010.10Protein kinase protein with tetratricopeptide repeat domain
NRXP_007132022.10hypothetical protein PHAVU_011G060100g [Phaseolus vulgaris]
COGYP_003267608.14.00E-08serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
Swissprottr|Q9FHD7|Y5126_ARATH0Probable serine/threonine-protein kinase At5g41260
trEMBLtr|V7AIT2|V7AIT2_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW04016.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00004483337487675-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.16.1


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K14500BSKEC:2.7.11.1Plant hormone signal transductionmap04075
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000004s00000456.1PF07714.12Pkinase_Tyr742881.30E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control30.654
SRR1783600control31.354
SRR1783602moderate drought stress35.274
SRR1811619moderate drought stress34.236

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.279
DRR006520Root Summer glycyrrhizin high producing strain24.130
DRR006521Root Winter glycyrrhizin high producing strain3.671
DRR006522Root Winter glycyrrhizin high producing strain3.297
DRR006523Root Summer glycyrrhizin low producing strain29.816
DRR006524Root Summer glycyrrhizin low producing strain29.955
DRR006525Leaf Summer glycyrrhizin high producing strain14.260
DRR006526Leaf Summer glycyrrhizin high producing strain13.775

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)16.454
SRR2868004Drought Stress (root)23.433
SRR2967015Control (root)16.215

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf12.974
SRR9715740Leaf18.250
SRR9715741Leaf14.716
SRR9715739Root9.468
SRR9715742Root20.854
SRR9715743Root20.012

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.417
SRR8749028MeJA induced 9h16.371
SRR8749029MeJA induced 9h7.329
SRR8749030Uninduced10.549
SRR8749031Uninduced0.645
SRR8749032Uninduced1.092

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root26.822
SRR8400027Control - Root38.423

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved