Gene detail

Gene detail information of Glyur000004s00000446

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G13490.2	9.00E-130	ADP/ATP carrier 2
NR	KHN30132.1	0	ADP,ATP carrier protein, mitochondrial [Glycine soja]
Swissprot	tr\|P25083\|ADT1_SOLTU	0	ADP,ATP carrier protein, mitochondrial (Precursor)
trEMBL	tr\|V7BZ46\|V7BZ46_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW22373.1}

Sequence

Transcript Sequence

>Glyur000004s00000446.1
AAATTTTCTGTTTCTTTTCTATAACTGCATTTGTGTTGACTTACACTTTGTATTAACACAATACACTAAGCACTGAAGCAGTGACGATCGATGGCTGATACTGATAAGCACCTACAATACCCNACAATCGTACAGAAGTTTGCTAGCCAGCTTCATCTGAGATCCAGCATTTCCCCACAAGTTGCAACTTGCTATGGAGGTTTGAAAAGGCCTGTTCAGTACTCAAATGCAGGGTTGCAGTGTGGTGCCATGTCGTCTAGTACTACAAATGATATGCAGCACTCTGTAGGTTCAGCAACTGCTTCACCTGTGTTGTTTGTTCCATCCCCATCAGAGAAGAACTTTGCAAGCTTTGCTACTGATTTTCTCATGGGTGGAGTTTCTGCAGCAGTGTCCAAGTCTGCAGCTGCTCCCATTGAGCGTGTAAAGCTTCTGATTCAAAACCAAGATGAGCTCATCAAGGCTGGTCGGCTCTCAGAGCCCTACAAGGGAATTGGAGATTGTTTTGCCAGAACAATCAAAGATGAGGGGTTTGTTTCACTGTGGAGAGGGAACACTGTCAATGTCCTCCGTTACTTCCCAACTCAGGCACTGAACTTTGCATTCAAGGACTACTTTAAGAGTCTGTTTAACTTCAAGAAAGAGAGGGATGGGTACTGGAAATGGTTCGCAGGTAACCTGGCATCTGGTGCTGCAGCAGGTGCTACATCCTCCGTCTTTGTTTACTCATTGGACTACGCTCGAACCCGCCTCNCCAGTGATTCCAAGGCTGTGACGAAAGGTGGAGAGAGGCAATTCAACGGTCTGATCGATGTCTACAGGAAGACTCTCCAATCCGACGGTATTGCCGGCCTCTACCGTGGCTTCAACGTTTCTGTTGTTGGAATCATTGTCTACCGTGGTCTATATTTTGGAATGTATGATTCCCTGAAACCAGTGCTCTTAGATAGTTTTCTGGCTAGTTTTGCTCTGGGATGGATGGTTACTATTGGTGCAAGCGTTTCGTCTTACCCGTTAGACACTGTTCGTAGAAGAATGATGATGACATCGGGTGAGGCTGTGAAGTATAAGAGCTCTTTTGATGCGTTCTCGCAAATTGTGAAGAAGGAAGGTCCGAAATCTCTGTTCAAAGGCGCGGGTGCGAACATCCTTCGAGCAGTTGCGGGTGCGGGTGTGCTTGCGGGATATGACAAACTTCANGTGCTTTTGCTGGGAAAGAAGTATGGTTCCGGTGGAGCTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00004	406658	409103	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006810 transport

GO:0055085 transmembrane transport

cellular_component
GO:0005743 mitochondrial inner membrane

molecular_function
GO:0005215 transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000004s00000446.1	PF00153.22	Mito_carr	87	183	4.90E-23
Glyur000004s00000446.1	PF00153.22	Mito_carr	191	286	1.30E-21
Glyur000004s00000446.1	PF00153.22	Mito_carr	287	373	3.30E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.956
SRR1783600	control	0.972
SRR1783602	moderate drought stress	0.392
SRR1811619	moderate drought stress	0.404

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.167
DRR006520	Root Summer glycyrrhizin high producing strain	0.172
DRR006521	Root Winter glycyrrhizin high producing strain	0.718
DRR006522	Root Winter glycyrrhizin high producing strain	0.699
DRR006523	Root Summer glycyrrhizin low producing strain	0.194
DRR006524	Root Summer glycyrrhizin low producing strain	0.266
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.722
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.769

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.369
SRR2868004	Drought Stress (root)	18.326
SRR2967015	Control (root)	7.198

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.609
SRR9715740	Leaf	1.321
SRR9715741	Leaf	16.249
SRR9715739	Root	0.963
SRR9715742	Root	2.531
SRR9715743	Root	2.706

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.179
SRR8749028	MeJA induced 9h	10.540
SRR8749029	MeJA induced 9h	16.927
SRR8749030	Uninduced	25.916
SRR8749031	Uninduced	24.188
SRR8749032	Uninduced	15.906

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.169
SRR8400027	Control - Root	6.423