Gene detail information of Glyur000004s00000428 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G51140.1 | 5.00E-39 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | KEH39468.1 | 1.80E-168 | transcription factor bHLH122-like protein [Medicago truncatula] |
| Swissprot | tr|Q9C690|BH122_ARATH | 1.00E-45 | Transcription factor bHLH122 |
| trEMBL | tr|A0A072VDF9|A0A072VDF9_MEDTR | 7.00E-169 | Transcription factor bHLH122-like protein {ECO:0000313|EMBL:KEH39468.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 316651 | 319901 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 38.623 |
| SRR1783600 | control | 39.057 |
| SRR1783602 | moderate drought stress | 35.346 |
| SRR1811619 | moderate drought stress | 35.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.548 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.346 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.450 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.275 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.566 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.596 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.192 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 42.035 |
| SRR2868004 | Drought Stress (root) | 35.040 |
| SRR2967015 | Control (root) | 33.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.278 |
| SRR9715740 | Leaf | 38.442 |
| SRR9715741 | Leaf | 26.214 |
| SRR9715739 | Root | 4.867 |
| SRR9715742 | Root | 16.285 |
| SRR9715743 | Root | 14.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.932 |
| SRR8749028 | MeJA induced 9h | 25.881 |
| SRR8749029 | MeJA induced 9h | 12.129 |
| SRR8749030 | Uninduced | 7.519 |
| SRR8749031 | Uninduced | 3.735 |
| SRR8749032 | Uninduced | 2.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.002 |
| SRR8400027 | Control - Root | 33.745 |