Gene detail information of Glyur000004s00000421 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G12900.1 | 1.00E-145 | |
| NR | XP_006597242.1 | 0 | PREDICTED: uncharacterized protein LOC100786740 isoform X2 [Glycine max] |
| trEMBL | tr|I1MD87|I1MD87_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G03680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 267757 | 269863 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.539 |
| SRR1783600 | control | 12.743 |
| SRR1783602 | moderate drought stress | 9.607 |
| SRR1811619 | moderate drought stress | 9.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.498 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.323 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.331 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.287 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.029 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.020 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.235 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.734 |
| SRR2868004 | Drought Stress (root) | 17.088 |
| SRR2967015 | Control (root) | 20.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.602 |
| SRR9715740 | Leaf | 1.417 |
| SRR9715741 | Leaf | 1.041 |
| SRR9715739 | Root | 5.214 |
| SRR9715742 | Root | 6.830 |
| SRR9715743 | Root | 6.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.879 |
| SRR8749028 | MeJA induced 9h | 17.238 |
| SRR8749029 | MeJA induced 9h | 8.266 |
| SRR8749030 | Uninduced | 9.159 |
| SRR8749031 | Uninduced | 5.108 |
| SRR8749032 | Uninduced | 4.762 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.671 |
| SRR8400027 | Control - Root | 25.143 |