Gene detail

Gene detail information of Glyur000004s00000413.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G73730.1	1.00E-48	ETHYLENE-INSENSITIVE3-like 3
NR	KHN33326.1	0	ETHYLENE INSENSITIVE 3-like 3 protein [Glycine soja]
Swissprot	tr\|O23116\|EIL3_ARATH	2.00E-68	ETHYLENE INSENSITIVE 3-like 3 protein
trEMBL	tr\|K7M3I6\|K7M3I6_SOYBN	2.00E-113	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G41751.1}

Sequence

Transcript Sequence

>Glyur000004s00000413.1
ATGGAGCATCTTCTGATTAATGGTGACACGTTGAACTACAGTTCAGATATAGATGTTGATGATATTAGATGTCACAATATAGCGGAGAAAGATGTCAGCGATGAAGAGATTGAAGCGGAAGAATTGGAGAGGCGGATGTGGAAGGATCGTATCAAACTCAAAAGGCTCAAGGAAAAACAGAAGCTTGCAGCACAGCAAGCTGCGGAGAAGCAAAAGCCCCGNCAGTCATCCGATCAAGCTCGTAGGAAGAAAATGTCCAGAGCACAAGATGGGATTCTTAAATATATGCTGAAGCTTATGGAAGTCTGCAAAGCTCGTGGATTTGTGTACGGAATCATTCCTGAGAAGGGAAAGCCGGTTAGTGGTTCCTCGGATAACATTAGAGCTTGGTGGAAAGAAAAGGTAAAATTTGATAAGAATGGGCCTGCAGCCATAGCCAAGTATGAAGCAGAATGCCTTGCCATGATAACTGAAACGCCACATGGTGTTCTTGTTGAGAATAAGCAAGCTGCTGCTAGTAGTGCTAGCAACTACGATGTTGATGGTGCTGATGATGGCGCCGGTTCNGTTTCTTCTAAAGAAAACAGGAACAACCAGTTTATGGATACCGAACCATCAGATAACTCACACAGGAATTCTGTCCAAGATACATTTCAAGCTAAGAAGCAACCTAGGAAAAAAAGAGCCCNTTTGAGGTCAAGCGCCGCAACTGACAAATTACCAGCACAATCTGACAATGAAATTTTACATGTTGAGCCAAGAAGCAAACGGCTCGATATGAACCAGACAGAAGCACAGGTCAATATGAACCAGACAGAAGCGCAGGGAGTTGGACTCCAGATTCATGGAAATGAACATGGCAACAATGGGATAGATCCTGCTTTGAGACCACTGGAAAAAGGACTTGAAGTGCCAGCTCAACTACCAGCACCTGAGTTTGATCATTACTCTTATCTACATGCGAACAACTTAATTCCCTCGGAAAGCATGTATGTGAGTGGAAGGCCATTGCACTATCCTGAGTTGCAAAACCCTGACATGCCCCATGATCTTTATAATCCAGTCGCAGGATATGGGCCTAGTCAGGATGGGCAGCAGTTGCAGCCTGGGGACAGTGAACCAATTAGGCCAGAGAATGATGCAGTCTCTGTGCCAGCAGTACATATGAAAGGGGACGAAATTACCGGAGGAGACTTGAATTATTTTGGCAAAGANGCATTTCAAAATGAGCTTGATAGGCCTATAGATCACTCTTTCTTTGGATCACCAATCAGTAACATAACTAGTGACTCAGCAGAGGCTGAACTACAGAAATTCCAGCACTTGTTGCTCAGAGGGGGTGAAGGTTCCCAGATTGGTATTAATGTTTATGCAGTTTTGAGGTTGAAAGGTATAATCTTAGCATTGACAAGTCATAAATTTACGGAACTTGAAGATCCGAAGTATGAATTCTGTTCAATTGATTATTACCCCATTACCATATCAATAAAATATGTTTTGGGTTTCATGTAAATGCGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00004	242189	244337	+

Gene family

Gene family	subfamily
Transcription Factors Family	EIL

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000004s00000413.1	PF04873.8	EIN3	40	156	6.80E-55

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	19.371
SRR1783600	control	19.178
SRR1783602	moderate drought stress	22.466
SRR1811619	moderate drought stress	22.428

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	27.099
DRR006520	Root Summer glycyrrhizin high producing strain	26.352
DRR006521	Root Winter glycyrrhizin high producing strain	18.666
DRR006522	Root Winter glycyrrhizin high producing strain	18.410
DRR006523	Root Summer glycyrrhizin low producing strain	29.714
DRR006524	Root Summer glycyrrhizin low producing strain	29.819
DRR006525	Leaf Summer glycyrrhizin high producing strain	21.702
DRR006526	Leaf Summer glycyrrhizin high producing strain	21.311

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	31.581
SRR2868004	Drought Stress (root)	40.386
SRR2967015	Control (root)	37.801

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	26.425
SRR9715740	Leaf	30.943
SRR9715741	Leaf	30.873
SRR9715739	Root	3.788
SRR9715742	Root	18.542
SRR9715743	Root	17.116

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	20.966
SRR8749028	MeJA induced 9h	39.096
SRR8749029	MeJA induced 9h	33.377
SRR8749030	Uninduced	53.643
SRR8749031	Uninduced	68.749
SRR8749032	Uninduced	53.539

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	26.486
SRR8400027	Control - Root	24.061