Gene detail information of Glyur000004s00000399 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G43320.2 | 2.00E-131 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | XP_006597006.1 | 0 | PREDICTED: uncharacterized protein LOC100786056 isoform X1 [Glycine max] |
| trEMBL | tr|K7M999|K7M999_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G03566.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00004 | 147273 | 151479 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.857 |
| SRR1783600 | control | 9.803 |
| SRR1783602 | moderate drought stress | 11.438 |
| SRR1811619 | moderate drought stress | 11.200 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 28.506 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.193 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.375 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.334 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 67.547 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 67.360 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.391 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.343 |
| SRR2868004 | Drought Stress (root) | 66.921 |
| SRR2967015 | Control (root) | 40.284 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 68.806 |
| SRR9715740 | Leaf | 52.285 |
| SRR9715741 | Leaf | 77.031 |
| SRR9715739 | Root | 14.342 |
| SRR9715742 | Root | 24.889 |
| SRR9715743 | Root | 22.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 38.749 |
| SRR8749028 | MeJA induced 9h | 49.069 |
| SRR8749029 | MeJA induced 9h | 58.728 |
| SRR8749030 | Uninduced | 103.121 |
| SRR8749031 | Uninduced | 83.631 |
| SRR8749032 | Uninduced | 75.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.652 |
| SRR8400027 | Control - Root | 41.059 |