Gene detail

Gene detail information of Glyur000004s00000376.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G06070.1	6.00E-128	Basic-leucine zipper (bZIP) transcription factor family protein
NR	XP_004486898.1	0	PREDICTED: probable transcription factor PosF21-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q04088\|POF21_ARATH	1.00E-154	Probable transcription factor PosF21
trEMBL	tr\|I1M571\|I1M571_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G42030.1}

Sequence

Transcript Sequence

>Glyur000004s00000376.1
CAAGGAGGAAGGGGTAAGGGTTCCGTACATGTGTGCGTGGGGTGGGGGTTGATGTCTTGACTTGGAAGCTTCTTCACTTTTATGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGACAAACCCGCCCCTTTCATTTCGAAAAATTCCCCTTTCTCTCCATTTCTAGGGTTTTTATTCCGATTCTCACTTTCACAATCTCCCAACCCCTCCTCTCTGCTCCGATCTCTCATCACTTCCATGATCTACGCACTAAGGTAAAAATCTCACTCCCTCCGAGTTATTTTTCTCTTTCTCATGTTTCAGAAATCACCATCGCATCAATTTTCAACACCGAAATTGATTATTCCTTTTTTATTTTTGCTTTGTTTTTCTTTTTATGGTTCTGAAATGAGATATCACTANGGTTTTGAAGTGATTGAACTTGATTATCTGTGGGATTGCGTAGAGTTCGTTTAGGATTAAGAAATCTGCATGGATAAGGACAAATCTGTGGGTCTCGGCGGTGGTTTGCCACCTCCATCGGCACGTTATTCGGGTTACTCACCCACCGGAAGTGCCTTTAATGTGAAACCTGAACCTTCATCAACGTATCCTCCACTTATTCCTGGTACCAGCTCGGATACTAGTCATTTCGGACACGGGATGTCCACAGATTCTAGTGGCTTTAGTCATGATATTAGCAGAATGCCCGATAATCCCCCGAGAAATCGAGGTCATAGGCGTGCTCACTCTGAGATTCTCACCCTGCCCGATGATATTAGCTTTGATAGTGACCTAGGTGTAGTTGGCGGCGCTGATGGACCCTCGTTCTCCGATGATACTGAGGAGGACTTGCTCTCCATGTACCTTGACATGGATAAATTCAATTCGTCATCTGCNACGTCCACATTTCAAATGGGTGAGGCGTCTAATACTGCGGCGGCATCAGGTTTGGTGCCAACGTCGGGGGCACCTACCTGTTCTGCAGAGAATATGGTTGTTAGTACTAATGAAAGGCCCAGAGTTAGACACCAGCACAGCCAATCCATGGATGGGTCAACAACCATCAAACCTGAGATGCTAGTCTCGGGTTCAGAAGACATGTCTGCAGCTGATTCCAAGAAAGCAATGTCAGCAGCCAAGCTTGCAGAGCTTGCCTTGATTGACCCCAAGCGTGCAAAGAGGATATGGGCAAATAGGCAGTCTGCAGCCAGGTCAAAAGAGAGGAAGATGCGCTACATTGCTGAGCTTGAAAGGAAGGTGCAAACATTGCAAACGGAAGCAACATCTTTGTCTGCACAATTAACTCTCCTGCAGAGAGATACAAACGGACTGAATTCTGAGAACAGTGAGCTGAAGCTGCGGTTGCAAACCATGGAGCAACAAGTTCACTTGCAGGATGCTTTAAATGACGCATTAAAAGAGGAAATCCAGCATTTGAAAATACTGACTGGGCAAGCTATGCCACCTAATGGAGGACCCATGATGAACTTTGCTTCTTTTGGAGGGGGCCAGCAGTTCTATCCCAATAATCATGCCATGCACACTCTTTTAGCTGCGCAACAGTTTCAACAGCTCCAAATTCATCCTCAGAAGCAGCAGCAGCATCAGTTCCAGCAACAAATACAGCAGCAACAAATGCAGCAGCAACAGCAGCAGGAACAACAACAATCAGGTGACTTGAAAATGAGATCAGCTACACCTTCTCCATCCCCCAAAGACAATCCTTCATCAGATGTAAATCCTTCAGCGGCCAAGGATTGTTGAGACTGCGATTTGTCTCCTTGTCGTGTTTCAAGTTTCCCTTTGTCTCGTGTCGTAGTGTGTTTAGGTACCAGCCTTGTTATATTTCTTTATTCTTAAACAGTACAAATGATCCTAGTTACAGATTGAGAATAATGCGCTGCATCTTTGCTATGTAAAATACTAAAATTCGTTGGCACCTTAGTTAATTGGCCATTGTTATACCGGGGTAGGGATGTTTGTTAAGTTTGCCTCCTGTTGCTTTGCATACAATTACATCCTAGTTACATCGAGAAAGTTGGCACACANTTTCCGTAGGAATTGTGGTGGCTTCCTCACAATCACTTTAGGGAATCTTAGAATGATCATAGGTAAGGAAAATAATCGCAAGGGTAAAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00004	47410	51289	+

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP
EAR motif-containing Proteins	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000004s00000376.1	PF00170.16	bZIP_1	227	285	1.20E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	48.568
SRR1783600	control	49.334
SRR1783602	moderate drought stress	55.584
SRR1811619	moderate drought stress	55.095

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	46.356
DRR006520	Root Summer glycyrrhizin high producing strain	45.400
DRR006521	Root Winter glycyrrhizin high producing strain	37.390
DRR006522	Root Winter glycyrrhizin high producing strain	35.809
DRR006523	Root Summer glycyrrhizin low producing strain	51.183
DRR006524	Root Summer glycyrrhizin low producing strain	50.894
DRR006525	Leaf Summer glycyrrhizin high producing strain	38.430
DRR006526	Leaf Summer glycyrrhizin high producing strain	38.639

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	43.542
SRR2868004	Drought Stress (root)	43.956
SRR2967015	Control (root)	47.772

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	35.938
SRR9715740	Leaf	39.487
SRR9715741	Leaf	47.037
SRR9715739	Root	20.116
SRR9715742	Root	31.868
SRR9715743	Root	29.737

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	78.081
SRR8749028	MeJA induced 9h	83.500
SRR8749029	MeJA induced 9h	91.197
SRR8749030	Uninduced	85.020
SRR8749031	Uninduced	90.046
SRR8749032	Uninduced	81.615

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	40.914
SRR8400027	Control - Root	33.624