Gene detail

Gene detail information of Glyur000003s00001249

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G45490.1	7.00E-135	ataurora3
NR	XP_006594130.1	0	PREDICTED: serine/threonine-protein kinase Aurora-3 isoform X1 [Glycine max]
COG	YP_003108731.1	3.00E-35	serine/threonine protein kinase with PASTA sensor(s) [Acidimicrobium ferrooxidans DSM 10331]
Swissprot	tr\|O64629\|AUR3_ARATH	5.00E-170	Serine/threonine-protein kinase Aurora-3
trEMBL	tr\|I1LZ26\|I1LZ26_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G20180.1}

Sequence

Transcript Sequence

>Glyur000003s00001249.1
CGTCTATCGGGGTAGTGGAAAATGTTGTCCCGTCGTCTTACTCTTCCTCCATCCCTGAACGACAGAACAATCAGTGTCGCTTTGAGTTAGAGATCGTTGCCTCCTCTCGTTAATTCAAATCAGTGTCGCTTTGACATCAATCTCCGAAAATGGCTTCGGAAAACCCACCGGAGCAGCGGAATTGGTCCCTCAATGACTTCGAGATCGGAAAACCTCTCGGCAAAGGCAAATTCGGCAGAGTCTACGTCGCCAGAGAACTCAAGAGCAAATATGTAGTGGCATTGAAGATCATTTTTAAGGAACAGATCGAGAAGTACAAAATTCAGCACCAACTGAGGAGAGAGATGGAGATACAGAGCAGTCTTCGGCACCCTAACATCCTGCGTCTCTACGGTTGGTTTCACGACGNCGACCGTGTTTTCTTGATCCTCGAGTATGCTCATAACGGCGAGCTTTATAGGGAGCTCAGGATGAAAGGCCACCTCACTGAGAACCAAGCTGCCACGTATATACTGAGCCTCACAAAGGCATTGGCTTATTGTCATGAGAAGCATGTTATTCACAGGGATATCAAGCCTGAAAATTTGTTACTTGACCATGAGGGCCGTCTTAAAATTGCAGATTTTGGTTGGTCTGTACAATCTAGAAGCAAAAGACATACGATGTGTGGAACATTGGATTATTTAGCACCAGAAATGGTTGAAAACAAAGCTCATGACTACGCAGTGGATAACTGGACATTGGGTATCCTTTGTTATGAGTTCCTCTATGGTGTTCCTCCATTTGAGGCTGAGAGTCAAAGGGATACCTTTAGAAGGATAATGAAGGTTGACCTAAGCTTCCCTTCCACCCCTTCTGTTTCTTCAGATGCCAAAAATCTGATTAGTCGGCTCTTGGTGAAAGACTCCTCACGAAGGCTCTCTCTTCAAAAAATAATTGAACATCCTTGGATAATCAAGAATGCAAATCCGATGGGTATTTGTAAGTAGCTATCAANTTTAGTCAGCCATGCATGTTTAACCATGGCCAGGAGGGATTAAGATTGAAATTCTGCATCTGAATCTGATGTTGCAAATATAAGCGTTTTTTGCAGTGTTCAATCTATCACCTGATGTTGTAAAAATTAACCTTGCAAACTTACCACTTTGAAAGCATGTATATTGTGGTCACATATAGCTAAATTGTCTGTCTTGGGGTTGGCCTAATTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00003	827621	830626	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.5

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0000226 microtubule cytoskeleton organization

GO:0000278 mitotic cell cycle

GO:0006468 protein phosphorylation

GO:0007049 cell cycle

GO:0007059 chromosome segregation

GO:0009966 regulation of signal transduction

GO:0032465 regulation of cytokinesis

molecular_function

GO:0004672 protein kinase activity

GO:0004674 protein serine/threonine kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000003s00001249.1	PF00069.20	Pkinase	17	268	1.50E-74

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.515
SRR1783600	control	2.537
SRR1783602	moderate drought stress	2.289
SRR1811619	moderate drought stress	2.317

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.419
DRR006520	Root Summer glycyrrhizin high producing strain	1.601
DRR006521	Root Winter glycyrrhizin high producing strain	1.102
DRR006522	Root Winter glycyrrhizin high producing strain	1.076
DRR006523	Root Summer glycyrrhizin low producing strain	2.902
DRR006524	Root Summer glycyrrhizin low producing strain	2.904
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.997
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.994

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.255
SRR2868004	Drought Stress (root)	2.771
SRR2967015	Control (root)	3.174

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.845
SRR9715740	Leaf	0.964
SRR9715741	Leaf	0.675
SRR9715739	Root	1.547
SRR9715742	Root	1.277
SRR9715743	Root	1.165

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.886
SRR8749028	MeJA induced 9h	2.188
SRR8749029	MeJA induced 9h	2.263
SRR8749030	Uninduced	0.732
SRR8749031	Uninduced	0.253
SRR8749032	Uninduced	0.167

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.285
SRR8400027	Control - Root	3.494