Gene detail information of Glyur000003s00001246.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61250.1 | 1.00E-94 | myb domain protein 17 |
| NR | XP_003623894.1 | 5.21E-155 | MYB transcription factor [Medicago truncatula] |
| Swissprot | tr|Q50EX6|ODO1_PETHY | 2.00E-61 | Protein ODORANT1 |
| trEMBL | tr|G7L3J2|G7L3J2_MEDTR | 2.00E-155 | Myb transcription factor MIXTA-like protein {ECO:0000313|EMBL:AES80112.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00003 | 813649 | 816116 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000003s00001246.1 | PF00249.26 | Myb_DNA-binding | 14 | 62 | 3.60E-13 |
| Glyur000003s00001246.1 | PF00249.26 | Myb_DNA-binding | 68 | 113 | 4.70E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.894 |
| SRR1783600 | control | 0.856 |
| SRR1783602 | moderate drought stress | 0.981 |
| SRR1811619 | moderate drought stress | 0.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.181 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.224 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.035 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.791 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.463 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.291 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.202 |
| SRR2868004 | Drought Stress (root) | 0.266 |
| SRR2967015 | Control (root) | 0.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.375 |
| SRR9715740 | Leaf | 0.252 |
| SRR9715741 | Leaf | 0.815 |
| SRR9715739 | Root | 0.600 |
| SRR9715742 | Root | 0.738 |
| SRR9715743 | Root | 1.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.151 |
| SRR8749030 | Uninduced | 0.119 |
| SRR8749031 | Uninduced | 0.234 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.815 |
| SRR8400027 | Control - Root | 3.120 |