Gene detail information of Glyur000003s00001227 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G23890.1 | 1.00E-27 | |
| NR | XP_003623879.1 | 2.06E-49 | hypothetical protein MTR_7g076620 [Medicago truncatula] |
| trEMBL | tr|G7L2K3|G7L2K3_MEDTR | 8.00E-50 | Uncharacterized protein {ECO:0000313|EMBL:AES80097.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00003 | 715943 | 716413 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.953 |
| SRR1783600 | control | 2.233 |
| SRR1783602 | moderate drought stress | 8.253 |
| SRR1811619 | moderate drought stress | 8.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.269 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.525 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 91.690 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 97.165 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.959 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.696 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 25.317 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.460 |
| SRR2868004 | Drought Stress (root) | 3.603 |
| SRR2967015 | Control (root) | 5.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.493 |
| SRR9715740 | Leaf | 30.946 |
| SRR9715741 | Leaf | 48.045 |
| SRR9715739 | Root | 3.148 |
| SRR9715742 | Root | 5.167 |
| SRR9715743 | Root | 4.120 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.020 |
| SRR8749028 | MeJA induced 9h | 2.177 |
| SRR8749029 | MeJA induced 9h | 0.204 |
| SRR8749030 | Uninduced | 1.301 |
| SRR8749031 | Uninduced | 0.401 |
| SRR8749032 | Uninduced | 1.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.375 |
| SRR8400027 | Control - Root | 2.935 |