Gene detail information of Glyur000003s00001226 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AFK35241.1 | 9.24E-157 | unknown [Lotus japonicus] |
| trEMBL | tr|I3S4P9|I3S4P9_LOTJA | 3.00E-157 | Uncharacterized protein {ECO:0000313|EMBL:AFK35241.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00003 | 711175 | 714826 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.475 |
| SRR1783600 | control | 4.539 |
| SRR1783602 | moderate drought stress | 4.224 |
| SRR1811619 | moderate drought stress | 4.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.862 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.879 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.862 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.972 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.702 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.595 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.069 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.476 |
| SRR2868004 | Drought Stress (root) | 10.226 |
| SRR2967015 | Control (root) | 8.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.678 |
| SRR9715740 | Leaf | 11.629 |
| SRR9715741 | Leaf | 7.269 |
| SRR9715739 | Root | 1.883 |
| SRR9715742 | Root | 5.344 |
| SRR9715743 | Root | 5.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.861 |
| SRR8749028 | MeJA induced 9h | 4.880 |
| SRR8749029 | MeJA induced 9h | 3.118 |
| SRR8749030 | Uninduced | 3.070 |
| SRR8749031 | Uninduced | 0.761 |
| SRR8749032 | Uninduced | 0.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.900 |
| SRR8400027 | Control - Root | 12.091 |