Gene detail

Gene detail information of Glyur000003s00001209

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G12600.1	2.00E-144	UDP-N-acetylglucosamine (UAA) transporter family
NR	XP_004492690.1	0	PREDICTED: UDP-galactose/UDP-glucose transporter 2-like [Cicer arietinum]
Swissprot	tr\|Q29Q28\|UTR2_ARATH	0	UDP-galactose/UDP-glucose transporter 2
trEMBL	tr\|I1L6P8\|I1L6P8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G39980.3}

Sequence

Transcript Sequence

>Glyur000003s00001209.1
AGTTTGAGTTTCAAAAATATTATCTTTTTGTTGAATTGGATTTTGGGTTGGTGCTCATTTTGGAAACTGAATAGAAGAAAAAGAAGGGGGCGTGCGTGTGTGTGATGAACAGATGAAGAACGAAGAGCAGGCTCGTAGGTTGTTTGGAATTTCACTCTCTGACAGACCCAGATGGCAGCAATTCCTCATTTGCTCATCTGGTTTCTTCTTTGGATATCTTGTTAATGGCATTTGTGAGGAATATGTGTATAACAGGCTCCATTTTAGCTATGGTTGGTACTTCACATTTGTTCAAGGGTTTGTTTACCTCTTTCTGATTTACCTCCAAGGTTTCACAAGCAAGCAAATGGTGAATCCATGGAAAACTTATGTGAAGCTTTCAGCTGTACTTATGGGTTCACATGGCCTAACAAAGGGGTCTTTGGCTTTCCTTAACTACCCTGCACAGATCATGTTTAAATCCACAAAGGTTCTGCCAGTGATGATAATGGGTGCCTTTATCCCTGGTCTGAGAAGGAAGTATCCAGTGCATGAATATATATCTGCAGTACTTCTGGTAGTTGGCTTGATCCTATTCACACTAGCAGATGCACAGACATCACCTAATTTCAGTGTCATTGGTGTTGTTATGATATCTGGCGCTTTGGTTATGGATTCTTTTCTGGGGAACCTGCAAGAAGCAATCTTTACTATGAATCCTGAGACCACACAGATGGAGATGCTCTTTTGCTCTACTGTAGTGGGTTTGCCTTTCTTAATCCCACCAATGCTTTTTACAGGAGAATTATTCAAAGCATGGACTTCATGTTCACAGCATCCTTATGTGTATGGTGTATTAGTCTTTGAAGCAATGGCCACATTCATAGGCCAAATCTCTGTCCTCTCCCTCATTGCCATCTTTGAACAACATGGGAGTGGACTATTACTCATAGCAATGGGGATCACATTGAAGATGTTGCCTGATAACAAACCCACCAACACCAAAAGGGTCTTAAGCTCTTCTCCAAGAGACGACAACAGAGCAAAATCTACTACTACTACTACTACTGGGGATGAAGAGTTGGGGACCCTGCCACATTCTGTAGGAGAAGATGATGAAAGGAGGCCCTTGGTCTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00003	648045	650975	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055085 transmembrane transport

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000003s00001209.1	PF08449.6	UAA	24	263	2.20E-62

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.746
SRR1783600	control	8.753
SRR1783602	moderate drought stress	11.626
SRR1811619	moderate drought stress	10.972

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.631
DRR006520	Root Summer glycyrrhizin high producing strain	10.669
DRR006521	Root Winter glycyrrhizin high producing strain	15.934
DRR006522	Root Winter glycyrrhizin high producing strain	15.518
DRR006523	Root Summer glycyrrhizin low producing strain	8.025
DRR006524	Root Summer glycyrrhizin low producing strain	8.187
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.296
DRR006526	Leaf Summer glycyrrhizin high producing strain	13.794

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	48.089
SRR2868004	Drought Stress (root)	57.322
SRR2967015	Control (root)	46.189

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.932
SRR9715740	Leaf	10.072
SRR9715741	Leaf	24.440
SRR9715739	Root	1.718
SRR9715742	Root	6.910
SRR9715743	Root	4.994

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	12.516
SRR8749028	MeJA induced 9h	22.403
SRR8749029	MeJA induced 9h	16.530
SRR8749030	Uninduced	26.087
SRR8749031	Uninduced	21.899
SRR8749032	Uninduced	12.117

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	27.605
SRR8400027	Control - Root	20.596