Gene detail information of Glyur000003s00001178 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61200.1 | 3.00E-33 | Thioesterase superfamily protein |
| NR | XP_004492674.1 | 5.91E-83 | PREDICTED: putative esterase F42H10.6-like [Cicer arietinum] |
| COG | YP_004879733.1 | 4.00E-06 | hypothetical protein OBV_00290 [Oscillibacter valericigenes Sjm18-20] |
| trEMBL | tr|C6T0W5|C6T0W5_SOYBN | 2.00E-77 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU15160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00003 | 401246 | 404916 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000003s00001178.1 | PF03061.17 | 4HBT | 86 | 158 | 5.40E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.996 |
| SRR1783600 | control | 6.463 |
| SRR1783602 | moderate drought stress | 12.516 |
| SRR1811619 | moderate drought stress | 11.938 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.177 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.175 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.945 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.816 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.581 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.676 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.598 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.606 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.567 |
| SRR2868004 | Drought Stress (root) | 3.830 |
| SRR2967015 | Control (root) | 3.284 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.859 |
| SRR9715740 | Leaf | 3.438 |
| SRR9715741 | Leaf | 2.283 |
| SRR9715739 | Root | 16.273 |
| SRR9715742 | Root | 5.291 |
| SRR9715743 | Root | 7.497 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.844 |
| SRR8749028 | MeJA induced 9h | 2.799 |
| SRR8749029 | MeJA induced 9h | 3.299 |
| SRR8749030 | Uninduced | 3.309 |
| SRR8749031 | Uninduced | 3.566 |
| SRR8749032 | Uninduced | 4.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.208 |
| SRR8400027 | Control - Root | 14.180 |