Gene detail information of Glyur000003s00001155 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G45540.1 | 0 | WD-40 repeat family protein / beige-related |
| NR | XP_004492654.1 | 0 | PREDICTED: uncharacterized protein LOC101505309 [Cicer arietinum] |
| trEMBL | tr|K7MU18|K7MU18_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G45582.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00003 | 259491 | 277069 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.045 |
| SRR1783600 | control | 10.044 |
| SRR1783602 | moderate drought stress | 9.562 |
| SRR1811619 | moderate drought stress | 9.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.904 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.778 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.838 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.740 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.418 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.384 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.793 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.050 |
| SRR2868004 | Drought Stress (root) | 28.884 |
| SRR2967015 | Control (root) | 31.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.901 |
| SRR9715740 | Leaf | 4.351 |
| SRR9715741 | Leaf | 4.745 |
| SRR9715739 | Root | 3.490 |
| SRR9715742 | Root | 25.152 |
| SRR9715743 | Root | 21.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.574 |
| SRR8749028 | MeJA induced 9h | 11.346 |
| SRR8749029 | MeJA induced 9h | 1.956 |
| SRR8749030 | Uninduced | 2.198 |
| SRR8749031 | Uninduced | 3.664 |
| SRR8749032 | Uninduced | 1.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.459 |
| SRR8400027 | Control - Root | 29.309 |