Gene detail information of Glyur000003s00001136.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17730.1 | 4.00E-18 | NAC domain containing protein 57 |
| NR | XP_004515256.1 | 4.06E-40 | PREDICTED: NAC domain-containing protein 78-like [Cicer arietinum] |
| Swissprot | tr|Q9FFI5|NAC86_ARATH | 5.00E-18 | NAC domain-containing protein 86 {ECO:0000312|EMBL:AED92405.1} |
| trEMBL | tr|V7C5E7|V7C5E7_PHAVU | 4.00E-40 | Uncharacterized protein {ECO:0000313|EMBL:ESW24588.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00003 | 73216 | 77255 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000003s00001136.1 | PF02365.10 | NAM | 6 | 40 | 1.20E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.398 |
| SRR1783600 | control | 0.265 |
| SRR1783602 | moderate drought stress | 0.608 |
| SRR1811619 | moderate drought stress | 0.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.949 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.018 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.805 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.849 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.533 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.762 |
| SRR2868004 | Drought Stress (root) | 2.899 |
| SRR2967015 | Control (root) | 2.086 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.270 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.346 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.369 |
| SRR9715743 | Root | 0.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.759 |
| SRR8400027 | Control - Root | 0.826 |