Gene detail

Gene detail information of Glyur000002s00000368.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G25390.1	3.00E-111	Protein kinase superfamily protein
NR	XP_003592612.1	0	hypothetical protein MTR_1g110130 [Medicago truncatula]
COG	YP_002763346.1	2.00E-25	putative serine/threonine protein kinase [Gemmatimonas aurantiaca T-27]
Swissprot	tr\|P0C5E2\|Y1839_ARATH	2.00E-107	Probable serine/threonine-protein kinase At1g18390 (Precursor)
trEMBL	tr\|G7IC76\|G7IC76_MEDTR	0	Wall associated kinase-like protein {ECO:0000313\|EMBL:AES62863.2}

Sequence

Transcript Sequence

>Glyur000002s00000368.1
ATGACCCCTCTTTTACTAATTTTAAAATCATTAATTATCTCGCAGCTGTTTCTGCTTCTTGTTTCATCTCAGGACGGAAAATGTCCACCCTCTTTTGATTGTGGATATTTTGGGAAGATCAGCTTCCCATTTACAGTCACACAACACCCACAGTGTGGCATATTACCCATACGTGGCTGTGATGACAAGAACCCATCTGCCCCCAAAAGCATCCAATTACGAGGCAACGCACCATCATCAACACGGTTTTTTAATGTTTCCTACGTGGATCGTGATACCATAACGGTCACAGATGATGTTCTACGGAGGAATATGCAATCCAGAAACTGCACAGCCTTGTTCAACGATTTTCCCCTTCCTCCCACCTCTCCTTTAGCTTCTTTCTACATCAAGTATAATATAACTATGTTCAGATGCAATCACTCCCTCAGTGTCACCCTTCCCAAGTTTTTTCATCATTATAGAAACTGTTCTGGTGGTTACCATGTCTACTATGCCTTTCCAAATACTGTGAAACCTCCCGGTTATGAGTGGCCAAGCTCTTTGGCAGGGTGTTCAGCGTCTCAGGTTGCAGTAAGAGACGAACCTACTGATGACCCCTTTGATTTTCTATCTCCTGAGATCGCCATTGTAGTACAGTTATCCGATGATTGTAAGAAATGTCTTCGTCACCAAGGGGGCCGATGTCAACTTGACATTCACAGAAATTTCCATTGTGCCAAAGGCATTGGACTCCCCTGCATCATTATAACTGGGTTGCTGATTACATGGTACTGCAAACGACATGTTCCTGATTCCTACTCAACAAATCCATACCCAGAGAGTGGCAGTGCCTACCTTGGGGTCCCAGTCTTCTCCTATAAGGATCTTCAAGTAGCAACAAAAAGTTTTGACCGTTCAAAAGAACTTGGAGAAGGAGGATTTGGGACTGTTTACTATGGAAAACTCAAAGATGGAAGGGAAGTTGCGGTGAAGCGCCTATTTGAGCACAATTACAGGAGACTGGAACAGTTCATGAACGAAATCAAGATCCTCACTCGATTGCACCACAGAAACCTCGTGTCCCTCTATGGCTGCACCTCACGCCACAGCCGTGAGCTACTCCTCGTGTACGAATACATTCCAAACGGCACCGTTGCGAGCCATCTCCACGGCGATTTATCAAAGGCCGGTTTGCTGACGTGGCCCATCCGAATGCAAATTGCAATTGAAACCGCCACCGCATTGGCCTATCTCCACGCCTCCGAAATCATTCACCGCGATGTGAAAACCAACAACATCCTCCTCGACAACACGTTCTGTGTTAAGGTTGCGGATTTCGGACTGTCGAAACTGTTCCCAAACGATGTAACCCACGTTTCCACGGCTCCACAGGGAACCCCTGGTTATGTGGACCCTGAATATCACCAATGCTACAGGCTCACAAACAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTTGTTGAGCTGATATCGTCTATGCCTGNGGTTGACATGAANCGGCACAAGGATGAGATAAATTTGGCGAATCTAGCTGTAAGGAGGATTCAGAAGAGTGCAATTGGGGAGCTGGTGCTGAGGAGGATTAACAATAATTATGAGAGTAGTGGGAATTATATTAAGGATGTTGTTGAGGCGGGACATGATCTGTCACCGCCTTCACCAGACCATGATGGGGTGAAACTGTGGAAGAATATGAAGTTGGCAACTTCGCCGAAGGCCGTGACTGATCATAAATGGGATACTAGTGATGAATCCACTACTCCTAATCTCACTCTGCTGCTGCTACTGGTCGTAGGGAACGTAAATGCGCACCCTGATGATTGTCCAGACTCGTTCGATTGCGGAAGCCTTGGGACGATTGGCTACCCTTTCACCAAGACACAATTCTTGGAATGTGGTACATTGGCAATCCAGGGTTGTGATGATCTCAACAAAACTGCAGTGAAGCATGTCCAATTAAGCAGTGGAGGAAAATTGTTTCAAGTTAGACAAGTTGATAGCCACTGGCCCTACAGTATTTCCATTGTTGATGAAGATTTCAGCAACCTAATTTTGCATCATAATGCTTGTGAGGCCTTCGGGTATAATAATATTACCCTCCCTCCTCCCTCTCCTTCTGGAACTTTTTATATGAAAAGCAACATAACCGTGTTCAAATGCAACCGCAGCCACAGAGTCGACCCTCCAAATAACTTCTTCAAAAATAGCACCTGTCCTCACTCTCGTTTTTACTTCGGCCCTCCAATACCTGATGATAATGAGTCCCTGCACTCTTCAGCAGCATCGTGTTCAGTGTCTCACCTTCCCGTGATCGAAGGTTTTGCATTATCCGGAAACCCATTTCCATTCTTAACTGATGAAATTACCATTCAATTACAATCTTCAGATTACTGTCNCCATTGTTACCGTGANANAAAAGGCCATTGTCGACTTAANGGCAACGGAGAAGTTTATTGCGCCATAAGGAAGGGTAGAAGTTCGACTTGGAAGCTAGGATTGGCTTTAGGTGTCGGTGTTGGACCATGGATCATAGTTGGGTTGTTCCTCGCGTTACGGCACTTCAAACGGAAATATGGTCCTGATGCACACGCCCAACTCCAATCAAGATACACTTCAGCTGATCCCCCCCCAAATCCTGACACAGAGACAAGCAAGATGTTCTTTTGGGTACCTGTCTTCTCCTATGAGGAGCTTCAACAAGCAACAAACAATTTTGACCTCACTAGAAAGCTAGGAGATGGAGGTTTTGGCACTGTTTACTACGTTGCAAGCCATCTCCATGGTGATTTAGCAAATGCTGGTTTGCTGACGTGGCCTATTCGCATGCAAATTGCCATAGAAACTGCTGCTGCATTGGCTTATCTCCATGCTTCTGACATCATTCACCACTTTGGGCTTTCAAGGTTGTTCCCCAACGATGTGAGCCATGTCTCCACNGCCCCACAAGGAAGTCCCGGTTACCTTGACCCTGAATATTTCCAACATTACCAGCTCACGAGCAAGAGTGATGTGTATAGCTTTGGTGTTGTGCTCATTGAGCTGATATCATCTATGACAGCNATTGATGCAGCCAGGGAAAGAGATGAAATTAACTTGGCAAATCTAGCCATGAGGAAGATAAGAAAAGGTGCAATCGCGGAGCTGGTGGACCCATCCCTTGGTTTTGAGTCAGACAGTGAAGTTAGAAGGATGCATCTCGAGAAAGGAGATGATGNTGCTGGGATCTCGCGCTCTGAAGAAGTACATCCACCATTATCAACCTCCAGGGACAGTGGGGTCAAGTTAGAAACTTTTACGAGCAACGAGTCACCATCTTCACCAAAGTTATTGACTGAGAAATGGGAAAGTGAATCAACTACGCCTAATGCAAGGGGCTAA

Protein Sequence

>Glyur000002s00000368.1
MTPLLLILKSLIISQLFLLLVSSQDGKCPPSFDCGYFGKISFPFTVTQHPQCGILPIRGCDDKNPSAPKSIQLRGNAPSSTRFFNVSYVDRDTITVTDDVLRRNMQSRNCTALFNDFPLPPTSPLASFYIKYNITMFRCNHSLSVTLPKFFHHYRNCSGGYHVYYAFPNTVKPPGYEWPSSLAGCSASQVAVRDEPTDDPFDFLSPEIAIVVQLSDDCKKCLRHQGGRCQLDIHRNFHCAKGIGLPCIIITGLLITWYCKRHVPDSYSTNPYPESGSAYLGVPVFSYKDLQVATKSFDRSKELGEGGFGTVYYGKLKDGREVAVKRLFEHNYRRLEQFMNEIKILTRLHHRNLVSLYGCTSRHSRELLLVYEYIPNGTVASHLHGDLSKAGLLTWPIRMQIAIETATALAYLHASEIIHRDVKTNNILLDNTFCVKVADFGLSKLFPNDVTHVSTAPQGTPGYVDPEYHQCYRLTNKSDVYSFGVVLVELISSMPXVDMXRHKDEINLANLAVRRIQKSAIGELVLRRINNNYESSGNYIKDVVEAGHDLSPPSPDHDGVKLWKNMKLATSPKAVTDHKWDTSDESTTPNLTLLLLLVVGNVNAHPDDCPDSFDCGSLGTIGYPFTKTQFLECGTLAIQGCDDLNKTAVKHVQLSSGGKLFQVRQVDSHWPYSISIVDEDFSNLILHHNACEAFGYNNITLPPPSPSGTFYMKSNITVFKCNRSHRVDPPNNFFKNSTCPHSRFYFGPPIPDDNESLHSSAASCSVSHLPVIEGFALSGNPFPFLTDEITIQLQSSDYCXHCYRXXKGHCRLXGNGEVYCAIRKGRSSTWKLGLALGVGVGPWIIVGLFLALRHFKRKYGPDAHAQLQSRYTSADPPPNPDTETSKMFFWVPVFSYEELQQATNNFDLTRKLGDGGFGTVYYVASHLHGDLANAGLLTWPIRMQIAIETAAALAYLHASDIIHHFGLSRLFPNDVSHVSTAPQGSPGYLDPEYFQHYQLTSKSDVYSFGVVLIELISSMTAIDAARERDEINLANLAMRKIRKGAIAELVDPSLGFESDSEVRRMHLEKGDDXAGISRSEEVHPPLSTSRDSGVKLETFTSNESPSSPKLLTEKWESESTTPNARG

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00002	943730	955012	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.5.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000002s00000368.1	PF07714.12	Pkinase_Tyr	300	500	1.40E-46
Glyur000002s00000368.1	PF07714.12	Pkinase_Tyr	962	1019	3.30E-08

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.106
SRR1783600	control	0.085
SRR1783602	moderate drought stress	0.028
SRR1811619	moderate drought stress	0.022

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.391
DRR006520	Root Summer glycyrrhizin high producing strain	0.254
DRR006521	Root Winter glycyrrhizin high producing strain	0.033
DRR006522	Root Winter glycyrrhizin high producing strain	0.076
DRR006523	Root Summer glycyrrhizin low producing strain	0.130
DRR006524	Root Summer glycyrrhizin low producing strain	0.131
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.989
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.910

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.390
SRR2868004	Drought Stress (root)	0.479
SRR2967015	Control (root)	0.700

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	37.792
SRR9715740	Leaf	12.878
SRR9715741	Leaf	46.367
SRR9715739	Root	0.437
SRR9715742	Root	10.878
SRR9715743	Root	8.878

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.766
SRR8749028	MeJA induced 9h	2.614
SRR8749029	MeJA induced 9h	2.822
SRR8749030	Uninduced	1.836
SRR8749031	Uninduced	0.236
SRR8749032	Uninduced	0.215

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.294
SRR8400027	Control - Root	0.509