Gene detail information of Glyur000002s00000344 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68330.1 | 2.00E-25 | |
| NR | XP_006589684.1 | 3.23E-122 | PREDICTED: serine/arginine repetitive matrix protein 2-like [Glycine max] |
| trEMBL | tr|I1LEV3|I1LEV3_SOYBN | 1.00E-122 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G41910.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 833433 | 834257 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.030 |
| SRR1783600 | control | 20.408 |
| SRR1783602 | moderate drought stress | 15.266 |
| SRR1811619 | moderate drought stress | 10.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.125 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.378 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.053 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.163 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.439 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.715 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.451 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.743 |
| SRR2868004 | Drought Stress (root) | 5.477 |
| SRR2967015 | Control (root) | 4.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.242 |
| SRR9715740 | Leaf | 0.048 |
| SRR9715741 | Leaf | 0.458 |
| SRR9715739 | Root | 3.452 |
| SRR9715742 | Root | 2.282 |
| SRR9715743 | Root | 2.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.307 |
| SRR8749028 | MeJA induced 9h | 2.552 |
| SRR8749029 | MeJA induced 9h | 1.224 |
| SRR8749030 | Uninduced | 0.221 |
| SRR8749031 | Uninduced | 0.232 |
| SRR8749032 | Uninduced | 0.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.980 |
| SRR8400027 | Control - Root | 11.028 |