Gene detail

Gene detail information of Glyur000002s00000329

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G77420.1	2.00E-132	alpha/beta-Hydrolases superfamily protein
NR	XP_004497084.1	0	PREDICTED: monoglyceride lipase-like [Cicer arietinum]
COG	YP_003705529.1	2.00E-35	alpha/beta hydrolase fold protein [Truepera radiovictrix DSM 17093]
Swissprot	tr\|Q9C942\|CSE_ARATH	4.00E-53	Caffeoylshikimate esterase
trEMBL	tr\|C6TJJ2\|C6TJJ2_SOYBN	0	Putative uncharacterized protein {ECO:0000313\|EMBL:ACU23082.1}

Sequence

Transcript Sequence

>Glyur000002s00000329.1
ATGGCCATGGAGCTATCTGTAAGTGTGACACTCGGGTTTCGATCACACAGCCACTCCCCCTCAGAAGAGGATCCACTCAATCACTTTCATCTAATACCCGTTTCAATCAAACCCAAGAAACCAAACACTACACTGACGGTGAGGGCAAAGAAAAAGTCAACCATTGAAGGTGTCAGCGACGAGTTGAACGCCATCGCTTCTCAGAATCTGGACTTTGCACCCTCTCGGAGACGGGTCCGAGCAGCCTTCACCGACGTGCAGCAGCAACTGGATCATTACCTATTCAAGACTGCGCCGGCTGGGATCAAAACTGAAGAATGGTATGAAAAGAATTCGAGGGGATTGGAGATTTTCTGCAAGAGCTGGATGCCAGAACCTCCAATCAAGGCAGCTTTGTATTTCTGTCATGGGTATGGCAGTACTTGCACTTTTTTCTTTGAAGGTATTGCAAAGCGAATTGCTTCTTCTGGGTATGGTGTTTATGCGATGGACTATCCGGGTTTTGGTTTATCCGAAGGACTACATGGTTATGTACCAAATTTTAATGAATTGGTTGATGACGTTATAGAACAATATACAAAAATTAAAGCAAGGCCTGAGTTGAGAGAGTTGCCTCGATTTATATTGGGGCAGTCAATGGGTGGAGCAATTGCTCTTAAAATTCATTTGAAGGAACCAAATGATTGGGATGGAGTAATCCTTGTAGCACCAATGTGTAAGATTGCAGAAGGCATGCTACCATCGGCTACAGTTTTGAAGGTGTTAAAACTTTTGTCTAAATTGACACCGAAGGCAAAACTGTTCCCATACAAGGACCTATCTGAGCTGATTTTCCGAGAACCTGGCAAGAGAAAATTGGCCGTTTACAATGTAATTTCTTATGATGATCAAACACGATTGAAAACTGGCATGGAACTTTTGAGTGCCACTCAAGATATTGAGTCACAGTTAGAGAAGGTATCAGCTCCACTATTGATTCTTCATGGAGCTGCCGATAAGGTGACAGATCCATTAGTAAGCCAATTTCTTTATGAAAAAGCCTCTAGCAAAGATAAGACTCTAAAGATTTATGAAGAAGGTTACCACGGCATTTTGGAAGGGGAACCTGATGACAGAATTTCTGATGTCCATAAGGACATTATCTCATGGCTTGACTTTAGGTGCTCAGTTAAATGAGGTTCATGCTATGAGTCTATCAGCATAATTGAGAATAGTGGCCTTGCTAAGTGTGTGGTTGAATAATGTATTTGAGAATTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00002	751997	755308	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01054	MGLL	EC:3.1.1.23	Glycerolipid metabolism	map00561
			Regulation of lipolysis in adipocyte	map04923
			Retrograde endocannabinoid signaling	map04723

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000002s00000329.1	PF12697.2	Abhydrolase_6	133	370	7.60E-27

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	12.178
SRR1783600	control	11.923
SRR1783602	moderate drought stress	9.725
SRR1811619	moderate drought stress	9.171

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.080
DRR006520	Root Summer glycyrrhizin high producing strain	8.942
DRR006521	Root Winter glycyrrhizin high producing strain	5.252
DRR006522	Root Winter glycyrrhizin high producing strain	4.770
DRR006523	Root Summer glycyrrhizin low producing strain	10.615
DRR006524	Root Summer glycyrrhizin low producing strain	10.233
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.397
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.386

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	28.484
SRR2868004	Drought Stress (root)	39.020
SRR2967015	Control (root)	29.867

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	13.947
SRR9715740	Leaf	11.137
SRR9715741	Leaf	16.723
SRR9715739	Root	8.075
SRR9715742	Root	13.068
SRR9715743	Root	12.645

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.421
SRR8749028	MeJA induced 9h	11.747
SRR8749029	MeJA induced 9h	6.314
SRR8749030	Uninduced	20.886
SRR8749031	Uninduced	3.684
SRR8749032	Uninduced	5.128

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.822
SRR8400027	Control - Root	19.703