Gene detail information of Glyur000002s00000322 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68490.1 | 9.00E-25 | |
| NR | NP_001238497.1 | 3.09E-84 | uncharacterized protein LOC100527343 [Glycine max] |
| trEMBL | tr|C6T416|C6T416_SOYBN | 1.00E-84 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU16417.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 699178 | 701569 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 98.954 |
| SRR1783600 | control | 99.475 |
| SRR1783602 | moderate drought stress | 145.071 |
| SRR1811619 | moderate drought stress | 144.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 126.316 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 125.155 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 467.498 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 454.129 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 303.562 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 305.073 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 56.846 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 56.547 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 72.012 |
| SRR2868004 | Drought Stress (root) | 64.512 |
| SRR2967015 | Control (root) | 84.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 77.905 |
| SRR9715740 | Leaf | 79.221 |
| SRR9715741 | Leaf | 84.792 |
| SRR9715739 | Root | 38.373 |
| SRR9715742 | Root | 63.095 |
| SRR9715743 | Root | 55.989 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.677 |
| SRR8749028 | MeJA induced 9h | 53.482 |
| SRR8749029 | MeJA induced 9h | 53.666 |
| SRR8749030 | Uninduced | 28.847 |
| SRR8749031 | Uninduced | 28.818 |
| SRR8749032 | Uninduced | 46.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 53.997 |
| SRR8400027 | Control - Root | 52.268 |