Gene detail information of Glyur000002s00000311 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68552.1 | 1.00E-05 | conserved peptide upstream open reading frame 53 |
| NR | ACU14383.1 | 2.91E-26 | unknown [Glycine max] |
| trEMBL | tr|C6SYR0|C6SYR0_SOYBN | 1.00E-26 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU14383.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 605600 | 608079 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.232 |
| SRR1783600 | control | 34.624 |
| SRR1783602 | moderate drought stress | 38.145 |
| SRR1811619 | moderate drought stress | 37.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 71.079 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 69.794 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.503 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.154 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 72.397 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 72.784 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.081 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 32.066 |
| SRR2868004 | Drought Stress (root) | 30.943 |
| SRR2967015 | Control (root) | 33.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 33.101 |
| SRR9715740 | Leaf | 48.495 |
| SRR9715741 | Leaf | 35.045 |
| SRR9715739 | Root | 60.232 |
| SRR9715742 | Root | 68.293 |
| SRR9715743 | Root | 62.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.957 |
| SRR8749028 | MeJA induced 9h | 5.651 |
| SRR8749029 | MeJA induced 9h | 2.712 |
| SRR8749030 | Uninduced | 10.066 |
| SRR8749031 | Uninduced | 0.719 |
| SRR8749032 | Uninduced | 1.357 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 43.461 |
| SRR8400027 | Control - Root | 44.610 |