Gene detail information of Glyur000002s00000303 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G39670.1 | 5.00E-80 | Glycolipid transfer protein (GLTP) family protein |
| NR | XP_004497102.1 | 1.29E-127 | PREDICTED: glycolipid transfer protein domain-containing protein 1-like [Cicer arietinum] |
| trEMBL | tr|C6TJF4|C6TJF4_SOYBN | 2.00E-123 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G42190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 542406 | 544148 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000002s00000303.1 | PF08718.6 | GLTP | 39 | 178 | 2.50E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.628 |
| SRR1783600 | control | 1.698 |
| SRR1783602 | moderate drought stress | 1.912 |
| SRR1811619 | moderate drought stress | 1.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.538 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.925 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.404 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.131 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.397 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.247 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.116 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.558 |
| SRR2868004 | Drought Stress (root) | 15.956 |
| SRR2967015 | Control (root) | 9.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 40.470 |
| SRR9715740 | Leaf | 39.466 |
| SRR9715741 | Leaf | 60.809 |
| SRR9715739 | Root | 12.158 |
| SRR9715742 | Root | 16.291 |
| SRR9715743 | Root | 13.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.388 |
| SRR8749028 | MeJA induced 9h | 31.971 |
| SRR8749029 | MeJA induced 9h | 27.430 |
| SRR8749030 | Uninduced | 82.607 |
| SRR8749031 | Uninduced | 41.966 |
| SRR8749032 | Uninduced | 38.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.352 |
| SRR8400027 | Control - Root | 21.848 |