Gene detail

Gene detail information of Glyur000002s00000301.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G25840.1	0	Protein kinase superfamily protein
NR	XP_004497282.1	0	PREDICTED: serine/threonine-protein kinase PRP4 homolog [Cicer arietinum]
COG	NP_864467.1	5.00E-13	serine/threonine-protein kinase pknA [Rhodopirellula baltica SH 1]
Swissprot	tr\|P51568\|AFC3_ARATH	4.00E-41	Serine/threonine-protein kinase AFC3
trEMBL	tr\|K7LLT9\|K7LLT9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G42220.2}

Sequence

Transcript Sequence

>Glyur000002s00000301.1
ATGGCCACCGATGCTCACGACTCTCGTCGCAAGCATCGCCGATCATCCTCTCCAGAGGACCTAGAAAAATCCTCGAAGCGCCACAAGCACCGCCACCACCATAGCCANCGCCACCGCCACCGCCACGGGAGCAAAAAGCGCGATGAAGAGATTGAATTCGACGGCGAAACAGTCGCCGCTGCTCCTTCCCCGACTCTCCCTCCCAATCATGCTCCGCGCAACCATCTCCCTGATGATGATGTGGAGGAGGGAGAGATTCTCGAAGACGAGCCTATCGACGGTGAGGTTGGAAAAAAGCAAAGTGAATCCGATGTCGAACCTGGCGAAATCGAGGTGACAGGAGCTCGAGATCTTCGATCTGATAAGAAAAATCCGGGAATTCCCGCTAAAAGTTCGAAAACTGAAAGTGAGGACTTTAGCCATGATAAATTTATTAGTCCTGCATTGGATGCAGAAGATGGGAAATGGCATCAGAGCAGCCACACTGGTTGTGGAGATGATGGTTCTCCAAACCACTCAAAAACCGAGACTCAAGNGGGGAGGGGTGTTCGAGCTAGTGCAGATGGTTGGGGAAATGGCCATTTGGATCCTAAATCATCCAGAGTGGATAATTGGCAAAATGGGGACCTTCGACATTTTAAAGGAAATGAGAAACTAAAAGGTGACTTTGATGATGAAGCAGTGGAGGCTAATAGAAGGGAAGTAAATTACCATGGGAATTCGTCCTCTGAAAGTGGAGGAGAAACAAATAGAATGTCAGGAAATTCTCCTTCTCATGATATATTCAGAAGTCGATCAAGATCAGCTGGTCATCCTAGGGACAGGTCTCGTTCTCGTAGTATAGTAGACGAATATGCTCATTCCAAGAGAAGGCACTCCAAGGAACAAGGGTCCCTCAGAAGGGAGCATCATCGTGGCAGTATAGATTTGGTGGAAGATGATAGAAGGGAACACAGCACCAGATATCACAGTCGGGAGGCCCGGGATAGGGATAGGGATAGGGATATGAGTAGGGACAGAGATGTGGATAGAGACTTGCATAGGGAAAAGAAACTAGAGGAAATAAGCAGGAATAAGGAGGTTGATTGGGTGCGTAGAAGGGAAAAAGAACNTGAAAGGAGCCGTGAGAGGTATAGAAGGGATGTGGAAAAAGACATAAGCAGGGAAAGGGAAGAAGGCAGGGATAGGAGAAGAGAAAAGGAAAGAGATAGGAGCTGGGAGACAGTGTATGAGAGGGATAGAAGAAGGGAAAAGGAAAGAGATAGGAGCAGGGACAGAACAAGGGGTGGTGAGAGAGATAGAGACCGGGAGAGTGAATGGGGCTATAGGAATAGGGAAAGGGATAACATTAAGGAGAGGGAAAGGCGAGATGATAGATATAGGCACAAAGATAAAGACGCCGTGAATGGTAAGGATAAGCATTTGCGTCGTGAGGATGGTAATGACAGTGGAGATAGATATAGAAGACATTCAAGACATGNAGAAAATGAATACCATGCAGATAGAAAAAGAAACTATGATCATTCTGTAGAAGTTTATAACTCTAGGACCATGGAAGAGGATGAAAGGAAACTAAAAAGCAGTGAGGTTGAACAAGATGACTTAGATGAGGATACATTGCAATTACCTGAACAAGAAGAGGAAGATCTCAACAGGATCAAAGAGGAGAGTAGAAGGAGAAGGGAAGCAATAATGGAGAAATACAAGAAGCAGAATCAGCAAATAGAACAAGCGGCTGGAAACGAAGGAAAAGACAAGGATGCGGACATTCCTACTGGCATTTCTGAAGCAATTGATGGTAAGAATGATNATGTTGATGATGTGGGACCGTCATTTGCTGTTGGGAAGTCTCCTCCAGAAAATGCGAACGTTGGCTCAGAGAAGGCATCTGGTGCNGGGGGCCTGGGAGAGGGTACTCCAAAGAGTGAGAGGTCAGCTGACATTTTTTGTGATGATATATTTGGTGAGACACCAACTGGAGTTCGGAAATCGGGAAAAGGAGATGGTTTACTGATTGAGAGGGTCGGCCTACATGACAATTGGGACGATGCAGAGGGGTATTACAGTTATCGTTTTGGTGAAATACTTGATGGCCGGTATGAAGTCACTGCTGCACATGGGAGGGGTGTCTTTTCAACAGTTGTACGTGCAAAGAATCTAAAAACTGGTAATGGTGAGCCAGATGAAGTAGCAATAAAAATTATTCGTAATAATGACACCATGTACAAGGCTGGTTTGGATGAATTGGTTATATTAAAGAAATTAGTAGGTGCAGATCCAGATGATAAACGTCACTGTGTTCGTTTCCTTTCAAGCTTTAAGTACAGAAATCATCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTACGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACTGCTGTGAGAGCATATGCAAAACAGCTTTTTATTGCACTGAAGCATCTCCGGAACTGTGGTGTTCTTCATTGTGATATAAAGCCTGATAATATGTTGGTGAACGAGGCTAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAGTAACTCCATATCTTGTGAGCCGCTTTTATCGTGCCCCTGAAATAATACTTGGCTTGCAGTATGATCATCCATTGGATATTTGGTCTGTAGGCTGTTGTTTGTATGAAGTGTATACTGGGAAGGTTCTTTTTCCNGGGCTTACAAACAATGACATGCTGCGGCTTCACATGGAGTTGAAGGGCCCGTTTCCAAAGAAGATGCTTAGGAAGGGAGCATTTACTGAACAACATTTTGACCAGGACCTGAATTTCCTCGCCACAGAGGAGGATCCTGTTACAAAGAAGGCCATAAGGCGGATGATTCTCAACATAAAGCCGAAAGATATTGGAACAATCATCACTGGCTCTCCTGGGGAGGATCCAAAAATGTTAGCCAACTTTAAGGATCTTCTTGATAAAGTTTTTGTCTTGGATCCAGACAAGAGGTTGACAGTCTCACAAGCGTTGAATCACCCATTCATCACTGGCAAGTGAACAATGTTGCTGAATTTGACTCCCAAAATGATATTCGCTGATATTTGTACATAATGATCCAATTGATATTAAGGTTCTAATCATTTGGCACTATTTATCTTCTCTGTACGGCCCAAGGAGTGTTCATCATGGTTGTCAGCCTGTTGAAGTGAAAAAGTGTGATGTCCCTACAGGCCTACACTTAACTGGCGGTTCTCAGTGGAATGTACTGTTTCTATTGAGACATATCACGGGTTTGAGGCATCCCTCCCATGCTTAGATGCATAAAAGGAACCCAGGAGAAGGCACTTCCACCGGATGTGTTTGGCTGAGTTCTAGAAGCACATTCATATCTCGGTACTGTATCTTGGTCCTGCAATTTTCAATGGAACATACACTCTCACTCTCCTTTGTGTGGTAAAACCCGGTGCTACAAAGCTCCTGCTATACGTTGTGGATCTATTGTACAGTCTTACTTTGCATTTCTACAAAAGGCTGGTTCCATGAATCACGGGTTCAAGTCGTGTGTTTTTGTGTGTGTGGATATTTAGATATTTAGGGGGGAGATGATGGTTGCCCGTCAGGGTACAAGGGACTTGTAAATAGGCCGCTGGCGGAGGGTGACTAGTTGAGAAATAAAATATCTTTAAATTTTTAAATATATTAATGGTTAGCCTTGGAACTTTCTAATTTTTTTTTTTGGATAAATATGCCCTGGTTGTGAACTTGAATGAAATCTTTTTGAATGACATTTATCCTTGGATGTGGGTGTGACTAGCTTCTACCTTAGATTCTCAATATAGAGCTTTCTTTTTTTGCTTGATATACATCGCTGCTCAATATCCTGAATCCTGATCTCTTTGTATATCTCTTCTGCCGTGTAATGTTGTGTAGCTTAAATTATGATTTTCAACAATGAAGCAAAGCGTTTTTGCGAAGTATGCCTAGAAGAAATTAATCTTTTACTTTATAAATCATTTGAAATGTTTATAGTTGAAAGTCATTAATGTGCATCCCCAGAGTGCCAATTTAGTAGGAAAGAAATGCTGCAAGATTGTTACGTTAGGTAGGGTTAGCATTTTGCTGAAATAGATAAATGGATGTGAAAAGAGATAATGCTGAAATGAGTTTATTTAAGCGCTCAGTTACTTAAATCCCGTGTCTACTTCTGAAAATTACATGTCCTTTTATCACCACCTGCTCTACCTATGTTTTTGTGTAAATGACTTCCCCACAGATCTCGGTGTTGGAAATTTAAGTTGTGTTGTGAGTTGTAACCTGACCTCGGTGAACTGAAATCTGAAATCTTACTCATG

Protein Sequence

>Glyur000002s00000301.1
MATDAHDSRRKHRRSSSPEDLEKSSKRHKHRHHHSXRHRHRHGSKKRDEEIEFDGETVAAAPSPTLPPNHAPRNHLPDDDVEEGEILEDEPIDGEVGKKQSESDVEPGEIEVTGARDLRSDKKNPGIPAKSSKTESEDFSHDKFISPALDAEDGKWHQSSHTGCGDDGSPNHSKTETQXGRGVRASADGWGNGHLDPKSSRVDNWQNGDLRHFKGNEKLKGDFDDEAVEANRREVNYHGNSSSESGGETNRMSGNSPSHDIFRSRSRSAGHPRDRSRSRSIVDEYAHSKRRHSKEQGSLRREHHRGSIDLVEDDRREHSTRYHSREARDRDRDRDMSRDRDVDRDLHREKKLEEISRNKEVDWVRRREKEXERSRERYRRDVEKDISREREEGRDRRREKERDRSWETVYERDRRREKERDRSRDRTRGGERDRDRESEWGYRNRERDNIKERERRDDRYRHKDKDAVNGKDKHLRREDGNDSGDRYRRHSRHXENEYHADRKRNYDHSVEVYNSRTMEEDERKLKSSEVEQDDLDEDTLQLPEQEEEDLNRIKEESRRRREAIMEKYKKQNQQIEQAAGNEGKDKDADIPTGISEAIDGKNDXVDDVGPSFAVGKSPPENANVGSEKASGAGGLGEGTPKSERSADIFCDDIFGETPTGVRKSGKGDGLLIERVGLHDNWDDAEGYYSYRFGEILDGRYEVTAAHGRGVFSTVVRAKNLKTGNGEPDEVAIKIIRNNDTMYKAGLDELVILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLQYDHPLDIWSVGCCLYEVYTGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDQDLNFLATEEDPVTKKAIRRMILNIKPKDIGTIITGSPGEDPKMLANFKDLLDKVFVLDPDKRLTVSQALNHPFITGK

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00002	527517	536528	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.5

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000002s00000301.1	PF00069.20	Pkinase	701	1015	6.10E-50

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	43.917
SRR1783600	control	44.659
SRR1783602	moderate drought stress	77.374
SRR1811619	moderate drought stress	76.700

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	43.959
DRR006520	Root Summer glycyrrhizin high producing strain	43.822
DRR006521	Root Winter glycyrrhizin high producing strain	47.228
DRR006522	Root Winter glycyrrhizin high producing strain	45.837
DRR006523	Root Summer glycyrrhizin low producing strain	57.299
DRR006524	Root Summer glycyrrhizin low producing strain	57.402
DRR006525	Leaf Summer glycyrrhizin high producing strain	35.587
DRR006526	Leaf Summer glycyrrhizin high producing strain	35.384

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	36.197
SRR2868004	Drought Stress (root)	42.312
SRR2967015	Control (root)	47.629

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	26.495
SRR9715740	Leaf	25.835
SRR9715741	Leaf	30.285
SRR9715739	Root	3.850
SRR9715742	Root	28.043
SRR9715743	Root	22.864

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	24.357
SRR8749028	MeJA induced 9h	52.545
SRR8749029	MeJA induced 9h	24.827
SRR8749030	Uninduced	39.020
SRR8749031	Uninduced	45.142
SRR8749032	Uninduced	31.556

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	39.739
SRR8400027	Control - Root	39.783