Gene detail information of Glyur000002s00000297 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006372203.1 | 9.50E-35 | hypothetical protein POPTR_0018s14280g [Populus trichocarpa] |
| trEMBL | tr|U5FGE4|U5FGE4_POPTR | 4.00E-35 | Uncharacterized protein {ECO:0000313|EMBL:ERP50000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 516912 | 518315 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.211 |
| SRR1783600 | control | 1.333 |
| SRR1783602 | moderate drought stress | 1.041 |
| SRR1811619 | moderate drought stress | 0.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.060 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.042 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 37.020 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 36.173 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 50.790 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 52.140 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.453 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.282 |
| SRR2868004 | Drought Stress (root) | 0.002 |
| SRR2967015 | Control (root) | 0.254 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.797 |
| SRR8749028 | MeJA induced 9h | 11.421 |
| SRR8749029 | MeJA induced 9h | 5.352 |
| SRR8749030 | Uninduced | 17.376 |
| SRR8749031 | Uninduced | 13.837 |
| SRR8749032 | Uninduced | 34.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.000 |