Gene detail

Gene detail information of Glyur000002s00000290.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G68640.1	6.00E-122	bZIP transcription factor family protein
NR	XP_007142889.1	0	hypothetical protein PHAVU_007G025500g [Phaseolus vulgaris]
Swissprot	tr\|Q9SX27\|PAN_ARATH	7.00E-165	Transcription factor PERIANTHIA
trEMBL	tr\|V7BDA6\|V7BDA6_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW14883.1}

Sequence

Transcript Sequence

>Glyur000002s00000290.1
ATGCAAAGCTTCAGGACAACTGATTCAGGCTCACCACTCCATTGCCATTCCTCCTTCTTGCTTCGGGGAGATGACACCAGCCGAAATCCAACGCGTTTCTCGGATCCTCACCGTTCATTTCAACAACAACACGATGCTGTTGATTTAAGCTCAAGCACTGTGTTTGGTGCAAAGTCGAACCATGTCGCTGTTGTTGGAAGTAACTTGCAGTATGGGACATTCAACACAAACCTTGGGTCTGCTTCAACAGGGGCAGTGTGCATTGAGACAGGAATGTTCCAGAAAGGAACCACTCTCGCCGCTTTGCCGCCGGTAAACGAGAATTGGGGTGATTCAGGCATGGCAGATAATAGTCAAAAGACTGAAGATACTTCCACAGATATTGACACTGATGATAAAAACCAATGTTTCTCAACCGTGTCTTGGGGCAATGGTGTTCGACACGGGGAACTTGTCGTTGTGGACTCCAAAGATAAAAAACAGACCAANGTTAAAGCTGAAGACCACAAGACTCTTCGTAGGTTGGCCCAGAATCGGGAGGCTGCAAGGAAGAGTCGGTTAAGGAAAAAGGCATATGTGCAGCAATTGGAGAACAGTCGACTTAGGCTTGCTCAAATAGAGCAAGAGCTTCAACGAGCACGGCAGCAGGGTGCATTTGTTGCAACTGGAGTTACGGGGGATCATGGACAATCAGTTGTTGGAAATGGTGCTTTAGCATTTGATATGGACTATGCCCGTTGGGTTGACGAGCATCAGCGTCTGATCAATGACATAAGATCAGCTATAAATTCTCAAACGGGTGATAATGAACTGCACCTTCTTGTTGATGGTGCCATGGCACATTATGAGGAATTATACAGGTTGAAGAGCATAGGGGCGAAGGCCGATGTGTTCCACATACTTTCCGGGTTGTGGAAGACACCTGCAGAAAGATGCTTCATGTGGCTTGGTGGATTCCGTTCATCTGAACTTCTCAAGATAGTTAGAAACCACCTTGAGCCGTTAATGGATCAGCAGTTGATGGGCATTTACAATCTGCAGCAGTCTTCTCAGCAGGCGGAGGATGCTCTATCTCAAGGCATGGAAGCATTGCAACAATCTCTTTCAGATACACTTTCCTCCACCTCCCTAGGCCCCACTGGATCTGGAAATGTTGCTGAGTACATGGGCCAAATGGCTATTGCAATGGGCAAGCTTGCCACACTAGAGAATTTCCTTCATCAGGCTGACCTCTTGAGGCAACAAACTCTGCAACAGTTGCATCGAATTTTGACCACACACCAAGCTGCTCGTGCTCTCCTTGTCATAAATGATTACGTTTCACGAATTCGGGCACTTAATTCATTATGGTTAGCGTGTCCTAAAGAGTACTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00002	487707	490965	+

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006351 transcription, DNA-templated

GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000002s00000290.1	PF00170.16	bZIP_1	168	198	1.40E-07
Glyur000002s00000290.1	PF14144.1	DOG1	253	331	2.10E-29

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.133
SRR1783600	control	0.134
SRR1783602	moderate drought stress	1.332
SRR1811619	moderate drought stress	1.241

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.463
DRR006520	Root Summer glycyrrhizin high producing strain	0.440
DRR006521	Root Winter glycyrrhizin high producing strain	0.080
DRR006522	Root Winter glycyrrhizin high producing strain	0.158
DRR006523	Root Summer glycyrrhizin low producing strain	0.310
DRR006524	Root Summer glycyrrhizin low producing strain	0.252
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.468
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.422

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.158
SRR2868004	Drought Stress (root)	0.990
SRR2967015	Control (root)	0.822

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.097
SRR9715740	Leaf	0.273
SRR9715741	Leaf	0.000
SRR9715739	Root	0.394
SRR9715742	Root	0.693
SRR9715743	Root	0.216

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	14.026
SRR8749028	MeJA induced 9h	8.260
SRR8749029	MeJA induced 9h	4.592
SRR8749030	Uninduced	0.987
SRR8749031	Uninduced	0.261
SRR8749032	Uninduced	0.703

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.329
SRR8400027	Control - Root	0.312