Gene detail

Gene detail information of Glyur000002s00000286

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G25510.1	5.00E-84	Eukaryotic aspartyl protease family protein
NR	KEH44258.1	1.50E-154	aspartic protease in GUARD CELL-like protein [Medicago truncatula]
Swissprot	tr\|Q9LS40\|ASPG1_ARATH	6.00E-92	Protein ASPARTIC PROTEASE IN GUARD CELL 1 (Precursor)
trEMBL	tr\|A0A072VS45\|A0A072VS45_MEDTR	6.00E-155	Aspartic protease in GUARD CELL-like protein {ECO:0000313\|EMBL:KEH44258.1}

Sequence

Transcript Sequence

>Glyur000002s00000286.1
ATGGATCATACGTTGTTCATCCTCTTAATCTTATGGGCTTCCCCTTTGGGAGCACACTCTCGGATCACACCCCACAATTCCAAGACCAGAGTGCTCGATGTCGCAACTTCCATTCAAAAAACCCACCAAGTTCTCAACCTCAACCAACAACAACAAAAACAACAACAACAACAGAAGAGTTATAGTTCTTCATCAGCATCACTCTCTCTGCAACTGCATTCTCGAGCATCCCTTCAGAGACATTCACAGGGTGACTACAAGTCTCTAACTTTAGCCAGACTCGAGCGCGACTCAGCCCGAGTCAGGTCTATCCTGACCCAGTTAGACCCAACGCTCAAAGTCGAGAAATTTTCGGGGCCCATCATCTCCGGAACGAGTCAGGGCAGCGGCGAGTACTTCTCCCGAGTCGGAATCGCGACATCAGCTGGGTGCAATGCGCACCCTGCGCCGATTGCTACCAGCAAGCCGATCCCATCTTCGAGCCGGCTTCATCGGCTTCCTACGCGCCGCTCTCTTGCGAAGCCGCTCAAGTGCCGCAACGGTAACTGCCTCTACGAGGTTTCCTACGGCGACGGATCCTACACCGTCGGCGACTTCGTAACGGAGACCGTTACCGTCGGCGATTCCACCCTCCGCAACATAGCCATCGGTTGTGCCGGCTTGCTCGGCTTAGGTGGCGGCTCGCTGTCTTTCCCGGCTCAGCTCAATTCGACGTCGTTTTCATACTGCCTCGTGGATCGTGACTCTGACTCGGTCTCAACCCTCGAGTTTGACTCGCCGTTTCCTCCTGACGCCGTCACCGCGCCGTTACGGCGTAACCCGGGGCTGGACACATTTTACTACGTGGGGCTCGAAGGGATCAGCGTCGGCGGCGAGATGCTACCGATTCCCGAAACGGCTTTTGAGGTGGATTCCGCAGGGAGTGGCGGGATCATCGTGGACTCCGGCACGGCGGTGACTCGGCTGCAGAACGACGTGTACATTTTGCTCCGGGACGCGTTTGTGAAGGGGGCGCGGGACTTGCCGGCGGCGAACGGCGTGTCGTTGTTTGATACTTGCTACGACTTGTCGTCGAAGAATAGCGTGGATGTGCCGTCGGTTGCGTTTCACTTCGGGGAGGGGAAGGAATTACTTGGTACCGGTGGATTCGGTGGGGACGTTCTGCTTTGCGTTCGCTCCAACCTTCTCCGCGTTGTCGATTATCGGGAATGTTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00002	477363	478696	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004190 aspartic-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000002s00000286.1	PF14543.1	TAXi_N	164	256	1.90E-14
Glyur000002s00000286.1	PF14541.1	TAXi_C	279	377	1.10E-23

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.712
SRR1783600	control	1.692
SRR1783602	moderate drought stress	1.863
SRR1811619	moderate drought stress	1.702

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.241
DRR006520	Root Summer glycyrrhizin high producing strain	2.342
DRR006521	Root Winter glycyrrhizin high producing strain	0.528
DRR006522	Root Winter glycyrrhizin high producing strain	0.371
DRR006523	Root Summer glycyrrhizin low producing strain	2.929
DRR006524	Root Summer glycyrrhizin low producing strain	3.224
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.084
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.858

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.020
SRR2868004	Drought Stress (root)	16.413
SRR2967015	Control (root)	14.480

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.905
SRR9715740	Leaf	2.474
SRR9715741	Leaf	1.837
SRR9715739	Root	6.018
SRR9715742	Root	4.224
SRR9715743	Root	4.248

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	11.016
SRR8749028	MeJA induced 9h	10.119
SRR8749029	MeJA induced 9h	9.138
SRR8749030	Uninduced	7.709
SRR8749031	Uninduced	7.079
SRR8749032	Uninduced	5.528

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.823
SRR8400027	Control - Root	5.002