Gene detail information of Glyur000002s00000284 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10420.2 | 0 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| NR | XP_003555887.1 | 0 | PREDICTED: uncharacterized protein ycf45-like [Glycine max] |
| COG | YP_007082013.1 | 4.00E-164 | hypothetical protein Ple7327_3231 [Pleurocapsa sp. PCC 7327] |
| Swissprot | tr|P51281|YCF45_PORPU | 2.00E-152 | Uncharacterized protein ycf45 |
| trEMBL | tr|I1NFG0|I1NFG0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G24740.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 464264 | 468721 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000002s00000284.1 | PF13238.1 | AAA_18 | 208 | 297 | 1.80E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.991 |
| SRR1783600 | control | 3.106 |
| SRR1783602 | moderate drought stress | 3.652 |
| SRR1811619 | moderate drought stress | 3.627 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.583 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.473 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.372 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.246 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.420 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.416 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 54.431 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 54.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.371 |
| SRR2868004 | Drought Stress (root) | 11.870 |
| SRR2967015 | Control (root) | 12.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 34.482 |
| SRR9715740 | Leaf | 36.137 |
| SRR9715741 | Leaf | 33.015 |
| SRR9715739 | Root | 0.847 |
| SRR9715742 | Root | 2.362 |
| SRR9715743 | Root | 2.723 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.501 |
| SRR8749028 | MeJA induced 9h | 8.784 |
| SRR8749029 | MeJA induced 9h | 3.554 |
| SRR8749030 | Uninduced | 6.006 |
| SRR8749031 | Uninduced | 7.741 |
| SRR8749032 | Uninduced | 4.549 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.688 |
| SRR8400027 | Control - Root | 10.989 |