Gene detail information of Glyur000002s00000280 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39210.1 | 2.00E-49 | Major facilitator superfamily protein |
| NR | XP_007142882.1 | 1.30E-71 | hypothetical protein PHAVU_007G024900g [Phaseolus vulgaris] |
| trEMBL | tr|V7BEH2|V7BEH2_PHAVU | 5.00E-72 | Uncharacterized protein {ECO:0000313|EMBL:ESW14876.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00002 | 434611 | 438114 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000002s00000280.1 | PF06813.8 | Nodulin-like | 30 | 129 | 6.40E-43 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.036 |
| SRR1783600 | control | 3.154 |
| SRR1783602 | moderate drought stress | 2.722 |
| SRR1811619 | moderate drought stress | 3.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.176 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.180 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.111 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.284 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.124 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.050 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.024 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.093 |
| SRR2868004 | Drought Stress (root) | 7.750 |
| SRR2967015 | Control (root) | 20.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.557 |
| SRR9715740 | Leaf | 0.396 |
| SRR9715741 | Leaf | 2.129 |
| SRR9715739 | Root | 5.971 |
| SRR9715742 | Root | 2.301 |
| SRR9715743 | Root | 3.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.106 |
| SRR8749028 | MeJA induced 9h | 0.021 |
| SRR8749029 | MeJA induced 9h | 0.084 |
| SRR8749030 | Uninduced | 0.064 |
| SRR8749031 | Uninduced | 0.007 |
| SRR8749032 | Uninduced | 0.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.413 |
| SRR8400027 | Control - Root | 10.121 |